G151699


Basic Information

Item Value
gene id G151699
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 13765655 ~ 13766027 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU205563
gttttttactgtaatgGAGAGCAGGTggagaatttaaaaaatgcatcgTCATCATACAACTTCAGTCAACTTATAATTGTTGAAGGTAAATATTAATCGATTAAATCGAGTAATCATGACAACCCTAAGGGAAACCTTCTGCTCGATCATCATTCACACCTTGTGCAccttgtttacacctggtcacttcctATGACCAGTATCTGGATTGTTTCCTGATTAGATTTCAGCCACATGCATGATTACATTTGGTAGTCAAACAGTGtttatgttcacacagcaggtaaatgtggTCCAAATCTGAAGTTTATTTTAGGCTGCTTACACtatctttttaatgtgacccatACGCTTCATTTGTCTGAAAAGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205563 True 373 lncRNA 0.37 1 13765655 13766027

Neighbor

gene id symbol gene type direction distance location
LOC103043540 NA coding upstream 14803 13747658 ~ 13750852 (+)
LOC103037413 foxl2 coding upstream 29038 13734809 ~ 13736617 (+)
LOC103040694 pax3a,LOC108439877,LOC108280216,LOC107738801 coding upstream 221239 13504905 ~ 13544416 (+)
trnag-ccc_1 NA coding upstream 284616 13480969 ~ 13481039 (+)
trnai-aau_11 NA coding upstream 320786 13444796 ~ 13444869 (+)
nop53 NA coding downstream 228792 13994819 ~ 14002138 (+)
LOC103038690 LOC103038690,LOC108443093,LOC107567262,LOC107655289,LOC100331216,LOC105901416,LOC108280251 coding downstream 242152 14008179 ~ 14038002 (+)
dmac2 NA coding downstream 313003 14079030 ~ 14084542 (+)
LOC103045664 LOC107726114 coding downstream 335863 14101890 ~ 14126748 (+)
chchd2 chchd2,LOC107655825,LOC107730989,LOC107574035,LOC107677095,LOC107567580 coding downstream 464516 14230543 ~ 14234482 (+)
G151633 NA non-coding upstream 21593 13741327 ~ 13744062 (+)
G151655 NA non-coding upstream 35541 13729824 ~ 13730114 (+)
G151632 NA non-coding upstream 82542 13678974 ~ 13683113 (+)
LOC111194545 NA non-coding upstream 92529 13668891 ~ 13673126 (+)
G151614 NA non-coding upstream 201291 13562385 ~ 13564364 (+)
G151730 NA non-coding downstream 199518 13965545 ~ 13966254 (+)
G151740 NA non-coding downstream 292198 14058225 ~ 14060372 (+)
G151753 NA non-coding downstream 319240 14085267 ~ 14086143 (+)
G151755 NA non-coding downstream 320932 14086959 ~ 14087323 (+)
G151772 NA non-coding downstream 419029 14185056 ~ 14186349 (+)
pcp4 NA other upstream 3142 13758442 ~ 13762513 (+)
G151634 NA other upstream 80808 13646680 ~ 13684847 (+)
G151621 NA other upstream 132053 13600609 ~ 13633602 (+)
LOC103039742 LOC108439864,LOC108280459 other upstream 430579 13297594 ~ 13335076 (+)
LOC107197015 NA other upstream 528918 13230102 ~ 13236737 (+)
LOC103044755 LOC108443098 other downstream 154398 13920425 ~ 13943509 (+)
sirt2 sirt2,LOC107726128,LOC107655297 other downstream 322542 14088569 ~ 14095319 (+)
LOC107196904 NA other downstream 622388 14388415 ~ 14509200 (+)
G151965 cld3,LOC103033895,LOC108424093 other downstream 1326693 15092720 ~ 15093893 (+)
G152262 NA other downstream 1970713 15736740 ~ 15737042 (+)

Expression


Co-expression Network