G151965 (cld3,LOC103033895,LOC108424093)


Basic Information

Item Value
gene id G151965
gene name cld3,LOC103033895,LOC108424093
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 15092720 ~ 15093893 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU205966
GTGAAATACACCATACTTAACAGGTAAATGTATATTATTctgaaaacacacatatatatttggccattttttttttttacaaaaataagttGATTCCTAAATTGCGAGGGGGAAAAACATATAACACACAAACAACCATATTCCATTTCCCAATAGTGGAGAAGAACTGCAACACAAGCATATATTTACAGTTGTGATGGTTATCTTGCTGTACAGTTAATGTGCAACCACaggaaaaatatacaaaacagcTTTTCCCAATGACCTTTGGACAATGACAGTgaccaaaacaaATTCGCTCACAACATTGTCTCGTAACATTGAAGCAACTCAagtcaaaaagttaaaaaacgTAATTCTCCTCTGGATCAGGGTGATCAGATGCGGGTACAGGGTAGTAAAACTCTTACCAGAGAGCCTAAGCTCTGGTTTAGACATAGTCCCTTCTGTCATAGCCGCTGGGGGGTACAGACCTCGTGGTTGAGTAGACCATCCTGCTTGGTGGTGCGtaccttttctcttcttttgggGGGCAACTGCAGCACAGAATGGACCCCCCTATCAACAGCAGGGCAGCAGCAGCCCATCCCAAGTAGAGGGAGCCGCCGATCTCACGTTTCTGCGGCTCGGTCACCCCTGGGTTGTAGAAGTTCATTATGATTGCGTTGGCAGTCCAGGACACTGGGATGATCTGCATGACAGCAGCACAAATGAATGTGGCTCCAGCGGCGATCATCACCTTGGCCTTGGTCACTTCCTCCTCAATGCAGTTGGTGCACTTAGCCCCAACAACGGACACCAAAACTCCTAGAACCCCCAACACAATGGAGATCACACACAGAGCCCGGGCAGCCTGGAGGTCCGAACTAAGAGCCAGCATGGAGTCGTAGATTTTGCACTGCATCTGTCCGGTGCTCTGGACCACGCAACTCATCCATATTCCCTCCCAGATGATCTGTGCCGTCACGATGTTGGATCCAATGAAGGCTGTGACCCTCCACATGGGCAAGATGCAAGATATGAGGGCGACGATCCACCCTAGAGTCGCCAAAGTGACACCCAATATCTCTAAACCCTGAGCCACCATTCTGGAACTTCTGATAACAGTGCCACACTCAGACAATCCACCACAGATATGAATACA

Function

NR:

description
claudin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205966 True 1144 TUCP 0.47 2 15092720 15093893

Neighbor

gene id symbol gene type direction distance location
LOC111194552 LOC108424001 coding upstream 38553 15023255 ~ 15054167 (+)
ppp5c ppp5c,LOC107703978,LOC107680091 coding upstream 74021 15000522 ~ 15018699 (+)
LOC103034871 LOC108424029,LOC108438718,LOC108424059,LOC108427257,LOC108424081,LOC108427247,LOC108427240,LOC103022575 coding upstream 123276 14967346 ~ 14969444 (+)
LOC103024607 LOC103024607 coding upstream 153401 14910203 ~ 14939319 (+)
LOC111194551 NA coding upstream 188105 14899016 ~ 14904615 (+)
LOC103032946 LOC108424027 coding downstream 31478 15125371 ~ 15126982 (+)
LOC103033016 hhatl,LOC103033016,LOC108435490,LOC107718176,LOC107688529,LOC107689424,LOC107722653 coding downstream 50215 15144108 ~ 15159882 (+)
LOC103032700 klhl40a,LOC103032700,LOC108435482,LOC108280764 coding downstream 68260 15162153 ~ 15168997 (+)
LOC103034194 LOC103034194,LOC108444227,LOC107585379,LOC107688441,LOC108280883 coding downstream 249082 15342975 ~ 15349653 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107689428 coding downstream 291151 15385044 ~ 15394649 (+)
G151958 NA non-coding upstream 39485 15052793 ~ 15053235 (+)
G151936 NA non-coding upstream 152266 14939744 ~ 14940454 (+)
G151944 NA non-coding upstream 207750 14882756 ~ 14884970 (+)
G151907 NA non-coding upstream 482628 14606790 ~ 14610092 (+)
G151905 NA non-coding upstream 508326 14582333 ~ 14584394 (+)
G151972 NA non-coding downstream 22572 15116465 ~ 15124447 (+)
G151989 NA non-coding downstream 94481 15188374 ~ 15192351 (+)
G151997 NA non-coding downstream 148019 15241912 ~ 15242951 (+)
G152004 NA non-coding downstream 185103 15278996 ~ 15280845 (+)
G152005 NA non-coding downstream 187396 15281289 ~ 15296917 (+)
LOC107196904 NA other upstream 583520 14388415 ~ 14509200 (+)
sirt2 sirt2,LOC107726128,LOC107655297 other upstream 997401 14088569 ~ 14095319 (+)
LOC103044755 LOC108443098 other upstream 1149211 13920425 ~ 13943509 (+)
pcp4 NA other upstream 1330207 13758442 ~ 13762513 (+)
G151634 NA other upstream 1407873 13646680 ~ 13684847 (+)
G152262 NA other downstream 642847 15736740 ~ 15737042 (+)
atg5 atg5,LOC107697282,LOC107661007 other downstream 1197076 16290969 ~ 16339410 (+)
G152383 NA other downstream 1365917 16459810 ~ 16464393 (+)
pmvk pmvk,tpm3,LOC103045363,LOC108280389,LOC108424039,LOC105896158,LOC105012731,LOC106570192 other downstream 1787873 16881766 ~ 16957079 (+)
G152437 LOC108424039,LOC103045363,LOC108280389,LOC100305075 other downstream 1864140 16958033 ~ 16962923 (+)

Expression


Co-expression Network