CI01000012_07038865_07063702


Basic Information

Item Value
gene id CI01000012_07038865_07063702
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7038754 ~ 7064005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07038865_07063702.mRNA
CCATAAAAAGAGCTCTCGTACGTTTTGATATTGTGTCTGGTTACATCCAAGCTATATTACTTTGAAATATGACGGTTACTTCCTGCCTTTGTTTGGTACAGTGTACCGGTCATGAACCATGATGGAAATGGAACCGTGAAAGATACCAGATCTTCCACTCTGAGAAGTGAGAGGTGTCCAGGGCACTCATGTTTGATCTTTTCAGCTCTTGGATTCAGGTGGTGTGAAACCTTTGCCGTCATATATGCGGCAGGCACTTCAAAAACACAACACGCATCGCGTTTAATCAGTATGCACTTCAGTCTTACAAAGTTCAATTATGTCAACCTTTTCAGGAAAAATTGCTCATTATATTCTGATGCAGCATTTCGAGAATGTTCTTTAAGTGAGACTTTACTCACAGGCTCAATGGGGGACTGCAATTTCCAGTCAATTGAGGTATTACAGACTGAACCTCCAATCGAAGCAGTCATAGTTGACCCAAAAGATCCTAAAAAAGCAGCGGAGCCTGCAATGAGCATCAATCGGACTTGTTCCTGTCACACTGGCAGTCTTAATCTGACGGGTGGGCTTGCCAACCATGCCATCAAAGGGCAACAAAACTGCATGCTGACAAGCTTTGCTGCTTATGAGGCTACGCTAAGTCACTTATTTGGCCATTTCATCATGGTAATGGCAGCAGCCATCATCCCATTATGTGCCGAAAAGCCTGAGGAGCATACAGATGAAGGAGAACGAGAACGAGAGAACAGCCATGAAGCACAGATCCATTCAATTCCATCTGTTAAAGTGCAGGACAGCTACACCACCATCAAAATCAATTTCCTCATACCACCATTTGATCTGCAATCGCGCACAGAAGCGCAGATAAAGTTACGCGCTAACGCAGGCAAAGTGCAGCCGCCTTTCAATTTAAACATCAAGTCTAAATTCCACCCATTAATGCTGCTCAATGCTGAGTGTTTTATAATTATGGGCTGTTAATTAAAGTTCAATTCAACTGCATTTATCCCAGAATTCATTGCAGGCCCTTGAAGGGGCTTTAGTGTAATACAGCTCACTTTGCAAAAGGTTTCACGTAACTATAGAAAAGATGAGCGACTGGGCAACAGATCAAATATTCTTAGTCTGATTACAAAGCGGAGTGCGCAGAGGGAATGACTGACTGTTATGAAATGAGTTATGAACATTGGGAGAGGTCCTTTATGGAGAAAGGGGGAAGAAAATCTTAGGGGCTTAGGGTATTACTGGAAGGCGTAACTCTGATAAGCCCATTGGTGGTCCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07038865_07063702.mRNA True 1287 mRNA 0.43 5 7038754 7064005

Neighbor

gene id symbol gene type direction distance location
CI01000012_07008711_07010256 NA coding upstream 27622 7007302 ~ 7011132 (+)
CI01000012_06993214_06995298 FLRT3 coding upstream 42977 6993053 ~ 6995777 (+)
CI01000012_06990634_06991686 NA coding upstream 46906 6990634 ~ 6991848 (+)
CI01000012_06938165_06970627 NA coding upstream 67853 6937590 ~ 6970901 (+)
CI01000012_06862144_06865773 NA coding upstream 172676 6861542 ~ 6866078 (+)
CI01000012_07089179_07092023 NA coding downstream 24478 7088483 ~ 7092030 (+)
CI01000012_07104155_07105373 NA coding downstream 40057 7104062 ~ 7105580 (+)
CI01000012_07108281_07109521 NA coding downstream 44276 7108281 ~ 7109922 (+)
CI01000012_07111569_07113225 NA coding downstream 47564 7111569 ~ 7113232 (+)
CI01000012_07120539_07126148 SNX5 coding downstream 56534 7120539 ~ 7126272 (+)
CI01000012_06826817_06842273 NA non-coding upstream 196330 6825923 ~ 6842529 (+)
CI01000012_06441231_06476986 KIF16BB non-coding upstream 442237 6441192 ~ 6477104 (+)
G72760 NA non-coding upstream 477143 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 640114 6397486 ~ 6398640 (+)
G72731 NA non-coding upstream 641744 6396744 ~ 6397010 (+)
G72757 NA non-coding downstream 10661 7074666 ~ 7087621 (+)
G73150 NA non-coding downstream 167181 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 195821 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 196855 7260860 ~ 7261065 (+)
G73253 NA non-coding downstream 274765 7338770 ~ 7338975 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1114449 5922385 ~ 5929186 (+)
G71623 NA other upstream 1222149 5813517 ~ 5816605 (+)
G71548 NA other upstream 1477321 5550493 ~ 5561433 (+)
G71221 NA other upstream 1498298 5538525 ~ 5540456 (+)
G71218 NA other upstream 1500370 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 742098 7805248 ~ 7811902 (+)
G73578 NA other downstream 1302801 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3157950 10223697 ~ 10236276 (+)
G75533 NA other downstream 4080812 11144817 ~ 11145739 (+)
G76385 NA other downstream 5566750 12630755 ~ 12675666 (+)

Expression


Co-expression Network