CI01000012_07104155_07105373


Basic Information

Item Value
gene id CI01000012_07104155_07105373
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7104062 ~ 7105580 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07104155_07105373.mRNA
TTATATAATCTCAGGCAGCATATTTGGATCCACCCAGACTTGTCGACAAAAGGAAAAATCAAAACAGACGGAGTCAACTAACACAGCTTAAATATGTATCTTAAGATGATTGTGCCGTTTTTGGCGGTGGTTTTGGCCGTGGCGAGCGCTGGAAAGGTTGGAGGTCCTGTGGATGCAGACATGAGCGAGGAAGGAGCTCAAAGTGCGTTACAGTTCGCAATGACCCAGTACAACAGACAAAGCAATGATGCGTATGTGAGTCAGGTTTCCGAAGTCATCAAGGTTCAAAAACAAGTTGTCTCTGGCCTGAAATACATCTTCACTGTGAAAGTGGGCAGAACCGCCTGCAGAAAGGATGGAGTTGAAACCCTGTGTGCTGTTCATGCGGACCCCACTGTTGCACGGGTATGACACACTGTCTAATTTACAGTATTGCAGTTACCTGTTTGCATTTCTCAATTTCCATATTAAAAGAGATTGCCTTTTTTCTTTTAGGTCACTACGTGCAAAATAGAGGTCTGGAGCCAGCCATGGATAAAATCAATTAAAGTCCTTAAAAACAGCTGCATATAGAGCATATTTCTAGTGCAGTTTGGGGGCTTTAACATTCATGCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07104155_07105373.mRNA True 618 mRNA 0.44 2 7104062 7105580

Neighbor

gene id symbol gene type direction distance location
CI01000012_07089179_07092023 NA coding upstream 12032 7088483 ~ 7092030 (+)
CI01000012_07038865_07063702 NA coding upstream 40057 7038754 ~ 7064005 (+)
CI01000012_07008711_07010256 NA coding upstream 92930 7007302 ~ 7011132 (+)
CI01000012_06993214_06995298 FLRT3 coding upstream 108285 6993053 ~ 6995777 (+)
CI01000012_06990634_06991686 NA coding upstream 112214 6990634 ~ 6991848 (+)
CI01000012_07108281_07109521 NA coding downstream 2701 7108281 ~ 7109922 (+)
CI01000012_07111569_07113225 NA coding downstream 5989 7111569 ~ 7113232 (+)
CI01000012_07120539_07126148 SNX5 coding downstream 14959 7120539 ~ 7126272 (+)
CI01000012_07136101_07161117 RRBP1A, RRBP1 coding downstream 30437 7136017 ~ 7161548 (+)
CI01000012_07312430_07315865 BTBD6A coding downstream 206092 7311672 ~ 7315917 (+)
G72757 NA non-coding upstream 16441 7074666 ~ 7087621 (+)
CI01000012_06826817_06842273 NA non-coding upstream 261638 6825923 ~ 6842529 (+)
CI01000012_06441231_06476986 KIF16BB non-coding upstream 507545 6441192 ~ 6477104 (+)
G72760 NA non-coding upstream 542451 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 705422 6397486 ~ 6398640 (+)
G73150 NA non-coding downstream 125606 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 154246 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 155280 7260860 ~ 7261065 (+)
G73253 NA non-coding downstream 233190 7338770 ~ 7338975 (+)
G73254 NA non-coding downstream 239015 7344595 ~ 7344915 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1179757 5922385 ~ 5929186 (+)
G71623 NA other upstream 1287457 5813517 ~ 5816605 (+)
G71548 NA other upstream 1542629 5550493 ~ 5561433 (+)
G71221 NA other upstream 1563606 5538525 ~ 5540456 (+)
G71218 NA other upstream 1565678 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 700523 7805248 ~ 7811902 (+)
G73578 NA other downstream 1261226 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3116375 10223697 ~ 10236276 (+)
G75533 NA other downstream 4039237 11144817 ~ 11145739 (+)
G76385 NA other downstream 5525175 12630755 ~ 12675666 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006764 cst3 coding NC_007124.7 CM002897.2 33675556 ~ 33683913 (-)