CI01000012_07111569_07113225



Basic Information


Item Value
gene id CI01000012_07111569_07113225
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7111569 ~ 7113232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000012_07111569_07113225.mRNA
ACGGGAGACCTTTTCAAAGACTTGACTGTGTTTTCAAAAAACGATGTCTACCTCAGAGACCTGCTGGCACAGATAGATGTCATTGATTGGAAGATGTATATTTGCTTAGCCACTGAGCTTCATCATGAGAAGATGCTGGAAGTCGTGGCAAAAAACAGAGGTGTACCTTTGAAGAAAGAAGCCGCGTGCCACATGTTGGTACTTCGAGAGCCATCAAAACATTCACAAGTTGACAGCTTATCACTGAAGCTGTCTTCTCTTAACGAGTCTCATCTTGAACTAGTGAACAGTAGCTGGAAGTTTGGCTGTGAACACAGCAAACTAATGATTAAGAATATGATTTTGAACTTTCCCTCTTGTTGTGTCCTGGACGCAGATGATCAACCAGTAGCATGGATATTAACTTATCCCTCCTGTGCTCTGGGAATGTTGTACACTGTTCCAGAACACAGAGGAAAAGGCTATGCAAAAGCACTGGTCACCATTATGTCAAAGAGACTCCACTCTCAAGGTTATCCAGTGTACTGTTTTATAGAGGAGGAGAACCAATTATCCTACAGGCTCTTCACAAGCCTGGGTTTCACAGAGGAACCAGATTACAGGGCAGCCTGGTTTGTATTTAATTATTTTTAGAGCAGAA

Function


NR:

description
LOC799646 protein, partial

GO:

id name namespace
GO:0005739 mitochondrion cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000012_07111569_07113225.mRNA True 640 mRNA 0.43 3 7111569 7113232

Neighbor


gene id symbol gene type direction distance location
CI01000012_07108281_07109521 NA coding upstream 1647 7108281 ~ 7109922 (+)
CI01000012_07104155_07105373 NA coding upstream 5989 7104062 ~ 7105580 (+)
CI01000012_07089179_07092023 NA coding upstream 19539 7088483 ~ 7092030 (+)
CI01000012_07038865_07063702 NA coding upstream 47564 7038754 ~ 7064005 (+)
CI01000012_07008711_07010256 NA coding upstream 100437 7007302 ~ 7011132 (+)
CI01000012_07120539_07126148 SNX5 coding downstream 7307 7120539 ~ 7126272 (+)
CI01000012_07136101_07161117 RRBP1A, RRBP1 coding downstream 22785 7136017 ~ 7161548 (+)
CI01000012_07312430_07315865 BTBD6A coding downstream 198440 7311672 ~ 7315917 (+)
CI01000012_07348648_07352865 NA coding downstream 235416 7348648 ~ 7353209 (+)
CI01000012_07359292_07362314 NA coding downstream 245483 7358715 ~ 7362378 (+)
G72757 NA non-coding upstream 23948 7074666 ~ 7087621 (+)
CI01000012_06826817_06842273 NA non-coding upstream 269145 6825923 ~ 6842529 (+)
CI01000012_06441231_06476986 KIF16BB non-coding upstream 515052 6441192 ~ 6477104 (+)
G72760 NA non-coding upstream 549958 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 712929 6397486 ~ 6398640 (+)
G73150 NA non-coding downstream 117954 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 146594 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 147628 7260860 ~ 7261065 (+)
G73253 NA non-coding downstream 225538 7338770 ~ 7338975 (+)
G73254 NA non-coding downstream 231363 7344595 ~ 7344915 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1187264 5922385 ~ 5929186 (+)
G71623 NA other upstream 1294964 5813517 ~ 5816605 (+)
G71548 NA other upstream 1550136 5550493 ~ 5561433 (+)
G71221 NA other upstream 1571113 5538525 ~ 5540456 (+)
G71218 NA other upstream 1573185 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 692871 7805248 ~ 7811902 (+)
G73578 NA other downstream 1253574 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3108723 10223697 ~ 10236276 (+)
G75533 NA other downstream 4031585 11144817 ~ 11145739 (+)
G76385 NA other downstream 5517523 12630755 ~ 12675666 (+)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location