CI01000012_07368295_07372257


Basic Information

Item Value
gene id CI01000012_07368295_07372257
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7368295 ~ 7372257 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07368295_07372257.mRNA
GAAGGAGATTTGTGGTCAACCAGAGACAAATCTCCACCATGGATGCATTGCTTAATGATATCACTCTCAGTATTGGAGCGCCGTTGGCTGTTCGAAATCTCTATACGCCACGATACGGCCACCGGGTCACGGACCTCACTGACCTACAGCAAGGGGCACAGTATGTGGCTGCAGGGTTTGAGCGTTTTAAGAAACTGGATTATCTGAGTGCAGGATTGAAGAAAGGTCCAATGTTCAGAGCTGTGGAGCCAACACAGGCTAAAGCACTTGTCAGGCCTAATGTTTCTGCAAAATGGAGGAAGGTCATTACTCTGCCCTGCATCATACATGTATTTAGGAACGGGGACATCCTCAGTCCTGCCATGCGTCTGATCATTCCCAGACACATGCAGAAAAATCTAGAGCAGATCCTGAGCCTCATTTCGGAAAAAGCCATGCTTCGCACAGGAGCTGTGCGCAGGCTCTGTACTCTGGAGGGCTTCACGGTGACCTCCACAGACGAGCTGGAGTCTGGGCAATGCTATGTTGCTGTTGGAACAGAGAGGTTCAAGAAACTCCCATATGTGGAGATACTGCTAAACAAAGCAACAGGCAGCAGCGCGGACAGTTCGTTATTGTTCTCTTATGATGATCCGACTCAGAGTAGAAAGATTTTTCCCCAGGACAGCCACAGTGACTCCACCCTCCTGAATTCACCTGAGAGGGAAGGTAGGCGTGTGAAGTCCACAGGAGATGAGGTGGAGCGAGAGAGCTCCCCTCGGCTGGTTAAGAGGAGAGGAAGGAGAGGAGAAAGAGAAGAGAACTCTGTTTTCTACGCCAGACCTGTGAGAGTTCGCAGACACCCACCCACACACAGACCTCCACCTAAAGCTGCAACAGATAAACACAGTGTGTTTAAGGCCTCTGAGAGGGAGGAGGTTCGAGGTGCTGAGGAGGTCGCAGAGGATGAAAACACAGCTGTAGAGCTTCCCATTGACCAGAGAGAAGCAGATATTGTGGAGGATGAAGAGCTTCCTGAAAGAGATCAATTTGACCCAGCCAGTACAAATCAT

Function

NR:

description
Zgc:123267

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07368295_07372257.mRNA True 1052 mRNA 0.50 9 7368295 7372257

Neighbor

gene id symbol gene type direction distance location
CI01000012_07366635_07367888 NA coding downstream 407 7366480 ~ 7367888 (-)
CI01000012_07356934_07358497 NA coding downstream 9683 7356863 ~ 7358612 (-)
CI01000012_07322669_07329009 NA coding downstream 38783 7322633 ~ 7329512 (-)
CI01000012_07316139_07320354 NA coding downstream 47102 7314756 ~ 7321193 (-)
CI01000012_07268516_07270856 NA coding downstream 97439 7268488 ~ 7270856 (-)
CI01000012_07374223_07375676 IQCC coding upstream 1790 7374047 ~ 7375676 (-)
CI01000012_07379927_07381734 CCDC28B coding upstream 6277 7378534 ~ 7381734 (-)
CI01000012_07388341_07401600 NA coding upstream 16084 7388341 ~ 7401756 (-)
CI01000012_07406125_07408361 NDUFAF1 coding upstream 33858 7406115 ~ 7408361 (-)
CI01000012_07504355_07506926 NA coding upstream 131203 7503460 ~ 7506926 (-)
G74113 NA non-coding downstream 22511 7345481 ~ 7345784 (-)
G74130 NA non-coding downstream 30110 7334138 ~ 7338185 (-)
G74137 NA non-coding downstream 100020 7266989 ~ 7268275 (-)
G74296 NA non-coding downstream 104270 7263770 ~ 7264025 (-)
G74363 NA non-coding upstream 191465 7563722 ~ 7563999 (-)
G74376 NA non-coding upstream 225656 7597913 ~ 7598119 (-)
G74378 NA non-coding upstream 228884 7601141 ~ 7601382 (-)
G74381 NA non-coding upstream 321119 7693376 ~ 7694697 (-)
G74477 NA non-coding upstream 461105 7833362 ~ 7836466 (-)
G72629 NA other downstream 1220801 6147011 ~ 6147494 (-)
G72294 NA other downstream 1902438 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1951515 5413369 ~ 5416780 (-)
G72204 NA other downstream 2066089 5293773 ~ 5302206 (-)
G74648 NA other upstream 892072 8264329 ~ 8265654 (-)
G74701 NA other upstream 994762 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1695649 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1699114 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1710479 9081877 ~ 9083489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00011028 NA coding CM030133.1 CM030133.1 8070846 ~ 8077484 (-)