CI01000012_07705100_07707005


Basic Information

Item Value
gene id CI01000012_07705100_07707005
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7703949 ~ 7707227 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07705100_07707005.mRNA
ACCTAGCTATTCAGTTGAATTGAAGGTAAATACAATCACAATGTCCTGGTAATGGCACTCCCTCACTCAAGAACAAGCTGAAGCTGTGAGCTACGGGCGCTGTGGAGGGTCAAATCTCGCTGGCTGATGTGTGCGGAAGTGCTGCTCCATCTGATATTAACAGCTGGAGACGCTTCGTTTCAGGATCGTAGAGGGTAATTACAGGACCAAAAGCTTACAGAGATGGACGGTAATTTGACGCTGAATTTGGCCAACTTCAGCACTCTCTTCGTGTGTATGGTGCTGAAGTTCCCGCAGATATTCGTTCTGATGCGGGCCAGAGCGACCGCTGGAGTCAGTCTGAACAGTCTGCTGCTGGAGCTGGTCGGGTTTCTAGTGTTTATGTCCTATCAGATGTACTATGACTACCCACCCCTCACATACCTGGAGTATCCCATCCTCATCGCACAAGCACGGATCTTCACCACCGTCGTCACCACAGGAGACACACAAGTCCTCATTCGGTTTGTCGTCATGACCGTTCTGAACATGTGGGTCACGGTTACAGTGATCTACTACAAACCACATGCAGTAAAACAGGATTAAGACTTCACACTTTCTGTTGCATACAGTGTATTCTCTAGATGTGGGGTTGGAGTTTTTTAAAGAAATGAACCGGATTCAGGTCAGTTGCTATTGGATGTAGCACTTTCTATATTGCAGTGTAAAAGATGTTGAGATTTACTGACTGCAACCAAAACCCTTTTTATCATAATGCTTTCCATATGATTTAATTAGTGCTTGCAAGGCACCATTCATATTTTTTTGCAGAGAATTTTAATATAAGGTGTGCTAATCTATTTTTTTCTTATAAATTTAGTACTTAAGAAATGTATTACATTTAAAAATCTTCAATTCTAGATGCAACAGTGATAATTTTTGCATCGTCTTGTCTTCCTTGCATCTAACCATTTTTATCCACCTTGACATATCTTAAACTTTAAAATTTTCTACACGTTTATTTTGCTGCCTTGCAAGCACTGGTGTTTTCTTCAGGACATGCGAATCTAGTATGTTTTGAGATGTGGGACAGAGTAGTTTTCTGCTCTCAATTGCTTTGAATCTCAGACGTGAATGTTGTGGAACCCAAATTGATGATGAATATCATTTGTCACATCAGAAGTTTGACCAAAGTGTTATGAAACAGTACATACATTCCTAGTATCCTCCCCTCATTCTTACATTGTTCCTTATAATTCCAGTGAGGTTGTTTCAAGTTCCTGCATTTGTACATGTTACAGATATACTGTTATGGTTTTTAAGTTAGTAGTTTGGTAGTTTTCTTTTTCTTTGGTAGTTTTCAATTTTCAGCTAAAGAACTGTTCAAATTGATTTAATGATATCAGGCTGCTGATCAGACTGTTTATTGTAGTTCACACAGGGATGATGTTTACATATGCTGAAATATGCACTGTTTTATATTGAACTGTATCATATGCTGATATAATGAAGGCAGGGTTTTCTGAACTGGATACCTTTCATATATTACTGATGTTGTGTTAAGCTTATTCACTTTATATTACTGAAGAAAAAACAAACAGTAGGACTCTTCTGAAGTCACTCAGATCAAGCAATGTTCAAGTACAAGATTATTAGAAAATGTTCATGAAAATTTCAATGATTTTTAGGTCTATAAAGCACAACTGTCTCTTTCCTAAGTACTTTAATAGATCTTTTGGATTTTATAAATCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07705100_07707005.mRNA True 1736 mRNA 0.38 4 7703949 7707227

Neighbor

gene id symbol gene type direction distance location
CI01000012_07556881_07563284 ARG2 coding downstream 140556 7556106 ~ 7563393 (-)
CI01000012_07537907_07544112 RDH11, RDH12 coding downstream 159837 7537441 ~ 7544112 (-)
CI01000012_07504355_07506926 NA coding downstream 197023 7503460 ~ 7506926 (-)
CI01000012_07406125_07408361 NDUFAF1 coding downstream 295588 7406115 ~ 7408361 (-)
CI01000012_07388341_07401600 NA coding downstream 302193 7388341 ~ 7401756 (-)
CI01000012_07716912_07750520 SOBPA coding upstream 9428 7716655 ~ 7750520 (-)
CI01000012_07761466_07761786 NA coding upstream 54205 7761432 ~ 7762131 (-)
CI01000012_07813654_07814853 NA coding upstream 105673 7812900 ~ 7814853 (-)
CI01000012_07925520_07928491 RDH14, RDH14A coding upstream 218229 7925456 ~ 7928491 (-)
CI01000012_07930029_07934648 5NT1A, NT5C1BA coding upstream 222065 7929292 ~ 7934881 (-)
G74381 NA non-coding downstream 9252 7693376 ~ 7694697 (-)
G74378 NA non-coding downstream 102567 7601141 ~ 7601382 (-)
G74376 NA non-coding downstream 105830 7597913 ~ 7598119 (-)
G74363 NA non-coding downstream 139950 7563722 ~ 7563999 (-)
G74113 NA non-coding downstream 358165 7345481 ~ 7345784 (-)
G74477 NA non-coding upstream 126135 7833362 ~ 7836466 (-)
G74490 NA non-coding upstream 148072 7855299 ~ 7855653 (-)
G74492 NA non-coding upstream 162157 7869384 ~ 7869615 (-)
G74498 NA non-coding upstream 191390 7898617 ~ 7898858 (-)
G74500 NA non-coding upstream 195753 7902980 ~ 7903181 (-)
CI01000012_07356934_07358497 NA other downstream 345404 7356863 ~ 7358612 (-)
G72629 NA other downstream 1556455 6147011 ~ 6147494 (-)
G72294 NA other downstream 2238092 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 2287169 5413369 ~ 5416780 (-)
G72204 NA other downstream 2401743 5293773 ~ 5302206 (-)
G74648 NA other upstream 557102 8264329 ~ 8265654 (-)
G74701 NA other upstream 659792 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1360679 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1364144 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1375509 9081877 ~ 9083489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006110 slc66a3 coding NC_007124.7 CM002897.2 32807419 ~ 32812903 (+)