LOC103043150 (LOC108424020,LOC108280635)


Basic Information

Item Value
gene id LOC103043150
gene name LOC108424020,LOC108280635
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 5333871 ~ 5344070 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258384.3
ACGATTTTTAGTTATTacatagttttagttttttaaatttgtaaacaGACAGCAACATTTAGCCTGCTATGGGAAAAACGTAACTTTGTGAAATAGCACATTTAGTAGGTGAACTGAAAATTGGCTTGAAAAAGGTTAGTATATAAAAAGTAGTATAGGTTTAATGTGATCATGGGCAGTCTAAATGTTTAATGGTAATCAGTTCTGTGGAACTGAGCTTTAGAGCGACATGCAGGGAAATTATTTCTTTGTTAATGGAGATGAGAGACTCTCCTCACGACATGTAGATAAAGGAGCAGTAGAGAGCAGCCTAGCTGTCCCACTGTCCACTGCAGCACACCAAACTCAACGCCTTCAGGAAtgatacatgtatatattttagcagatttaaactttaactttaaaggGAAGGACTTGTGTTCGTTGTGTGAAGAAGGAATTGCGTTTTTACTGCAGTCATTTCTCCTCTGAAACTGGATATAACACTTTTGGCTTTATATTTAATTACGGACGGAATATCTACAAAGGAAAAATGAACAGTTTATCGGTAGAGGCCTAAGGCAAAGAAATgTACGGCTTTATTAACACATGTTTGAAGTCGCTGGTGATCGATAAATTTGGAGAAGACACATGGAATAAACTCAGggaTGCCGCATGTGTTCAGGATACCTTCATGACTTACGAAGTGTACAAAGATGAGATTACCGTACGACTGGTAACTGAGGCCTGCAGACTCCTTGATGTTGAGGCTAGTGTGGTGCTGAAACTGTTTGGGGAATACTTCTTTGAGTTCTGTAAAAGATCAGGCTACGACCACATGATGCGCACGCTGGGAGCGAATCTCTTTGAGTTTATAGAAAATCTGGATGCTCTGCACGGCTATCTCTCCATTTCTTACAAGGAGATGAATGCTCCATCATTTCGTGTGGAGAAGAACAGTGATGGGACTATGCTCTTGCATTATTACTCTGACCGCAGGGGTCTCTGTCACATTGTTCCTGGCATCATTGGAGCTGTAGCGAAAGACTTCTTCAACAGTCGTATAGAAATGAAGATTGTGAATCAGATGGAGGAGGTGGAGAgaacaggaaagaaagagcatgtTGTTTTCCTCATAACCCAGCACTTTCCAGACAAAATATGCAGTAAAAGCACATCATCACCTTCACAGCAGACACAGAAGCCCTCAGGTTGCAGACACAACAAAGTACATATAAACAAGCAGGAGGTGGAAAGGTCAAGACAGATAAAAAAGCAAATCTGTGGTACACAGAGGAATCATTGGGAGATGGTCAGGAGCTTGGTGCAGCTGGGAAAAGGTAAACTTTTGAGGGGATTTGAGCCTGTTTACCCTAACGAGCTCTGCATAGATCTAAAGACGTTCTGCAATGCCTTTCCTTTCCATATTGTGTTTGATGAAGAATTGAGGGTGAGGCAGGCAGGGGTGGCAGTGCAGAAGATTGTGCCTGGACTGCAGACCATGGGGATTCAGCTGGACCAATACTTCACCATCCTGCACCCAGAGGTCACCTTCACCATCGCCAGCATTCGCAAATTTATTAACAGTCATTTTGTGCTGCAAACTCGTCGAGAGATGATGCCAGAGAGCTGGAAAGACACACCTATGCTGGAGCTCAGAGGTCAGATGTTGTGGATGGCCTCTCTCCGCTGCATGCTCTACCAGGCATCACCTTTGCTCCGCAGCCTGCAGGAGCTGGAAGAGAGGCGCATGTACTTGTCGGACATCGCCCCGCACGATGCCACGCGCCACCTCATCCTGCTCAACCAGCAGCGGCTGGCCGAGATGGAGCTGTCCAGCCAGCTAGAGCGCAAAAAGGAGGAGCTACGGCAGCTCTCTCAGCACCTGGAGCAGGAGAAGCAGAAGACAGAGAACCTGCTGTACGCCATGCTGCCCAAACACGTGGCCAACCAGCTGAAGGAGGGCAAGAAAGTGGAGGCAGGTGAGTTTAAGGAATGCACCATCCTATTCAGTGATGTGGTAACATTCACCACCATCTGCTCCCAGTGTGAGCCGATTCAGATCGTCATCATGCTCAACTCCATGTACCTCAAGTTCGACCGCCTCACAACTGTGCACAATGTTTACAAGGTTGAAACGATAGGTGATGCCTACATGGTAGTAGGGGGTGTACCAATCCCAGTTTCCAGTCACGGAGAGCGAGTGGCTAACTTTGCCCTAGGGATGATTATAGCTTCTAAAGAGGTCACCAACCCTATTACAGGAGGCCCCATTCAGATTCGAGTGGGCTTGCACAGTGGTCCAGTGCTTGCAGGTGTGGTTGGGGAGAAGATGCCACGCTACTGTCTTTTCGGAGACACGGTGAACACGGCATCTCGGATGGAAAGCCACGGTCTGCCTGATAAGATCCATGTCAGCCCCAATGTATATTAtGCTCTGCGGGATAAGGGCTTTCAGTTAGAAGAGCGTGGGGAGATCGATGTGAAGGGTAAAGGCAGGATGCGAACCTATTTCCTTGTGAAGAACTTGAGAGCCACAGAGAGTGAGATCATGGGCCGCTGGACAAGGGAAGCTGGCTCTGGTCAGGCGTCGGTTCAGTCCAATTGTGACTGCAGCTCTGAGTTACCTGCTTTTAGACCTTCTTTGCAAGTCATTCAAAGCAGTGACAGACGGCCCACTGTAGCCATGCGGTACGGTGACAGTTTGAATGAGGAAGAGCCTCCAGCCACATTTACTGAAGCCCTGCCCAGTGCTAAAAGCCCAACAGAGTTACTATCACAAAAAGGTAAATCTCGGGACTCTGAGAGCTACGGCAGTCTGCACAGTGGGAACAGATCTGAAGATGAGCCGTTCCATTTGAATGAAGCTGTCCGCCGTGGTCCAGACGGAGCTGAACCTCCccctgctgcagctgctgctcaCAGAAAACAGCACGTTTGTAGCAGATTCTGTGTGGTGGTCTAAAAAAGCACAGAGGATTCCAGTAGATCCAGTATCTGAGGAGTTAGAGGTATAGTAGAAAATGTGTTCATGGATATACACTA

Function

NR:

description
PREDICTED: guanylate cyclase soluble subunit beta-2-like

GO: NA

KEGG:

id description
K01768 E4.6.1.1; adenylate cyclase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258384.3 True 3024 mRNA 0.47 17 5333871 5344070

Neighbor

gene id symbol gene type direction distance location
mmp28 mmp28 coding upstream 28952 5273915 ~ 5304919 (+)
LOC111194496 taf15,LOC107103138 coding upstream 60769 5262341 ~ 5273102 (+)
LOC111194493 NA coding upstream 112737 5217173 ~ 5221134 (+)
LOC103032540 cldnj,LOC108424024,LOC108280332,LOC107749063,LOC107680085,LOC107551261,LOC107703975 coding upstream 116785 5215285 ~ 5217086 (+)
LOC103032228 NA coding upstream 122096 5210309 ~ 5211775 (+)
rsrc1 rsrc1,LOC108424082 coding downstream 347765 5691835 ~ 5912829 (+)
mlf1 NA coding downstream 571529 5915599 ~ 5932823 (+)
gfm1 gfm1 coding downstream 591118 5935188 ~ 5949403 (+)
LOC111194497 NA coding downstream 620706 5964776 ~ 5965375 (+)
mfsd1 mfsd1,LOC106580941 coding downstream 638340 5982410 ~ 6002460 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding upstream 107531 5223649 ~ 5226340 (+)
G149574 NA non-coding upstream 296077 4962090 ~ 5037794 (+)
G149572 NA non-coding upstream 399637 4932964 ~ 4934234 (+)
G149571 NA non-coding upstream 401034 4930813 ~ 4932837 (+)
G149366 LOC108410861 non-coding upstream 424040 4907417 ~ 4909831 (+)
G149635 NA non-coding downstream 774 5344844 ~ 5345434 (+)
G149644 NA non-coding downstream 28939 5373009 ~ 5375260 (+)
G149652 NA non-coding downstream 81822 5425892 ~ 5508053 (+)
G149757 NA non-coding downstream 442855 5786925 ~ 5816467 (+)
G149760 NA non-coding downstream 605781 5949851 ~ 5950341 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other upstream 75010 5227918 ~ 5258861 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other upstream 133886 5196141 ~ 5199985 (+)
LOC111194607 NA other upstream 219155 5111324 ~ 5114716 (+)
G149595 NA other upstream 231513 5090982 ~ 5102358 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 569026 4684608 ~ 4764845 (+)
G149754 NA other downstream 381199 5725269 ~ 5727420 (+)
c17h3orf80 NA other downstream 1238976 6583046 ~ 6586369 (+)
G149984 LOC108444119,LOC108444125,LOC108412201,LOC108416439 other downstream 1591271 6935341 ~ 6947936 (+)
LOC111194506 NA other downstream 1905095 7249165 ~ 7251366 (+)
G150099 NA other downstream 2425614 7769684 ~ 7805254 (+)

Expression


Co-expression Network