CI01000012_07761466_07761786


Basic Information

Item Value
gene id CI01000012_07761466_07761786
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7761432 ~ 7762131 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07761466_07761786.mRNA
AGTGATGGATTCGGCATCCAGCTGTTTTACATCTACTTTTAATTCCTTTTGTAATACTTCCCTCTTGTAGAAATCCCATAAGCATCTTTTTGAAATGGAGACACACTAACACACGCATTCTCACACACACACTTCAGCGGACACAATGCACACACAATATAAACAAGCAGGGATTACAATGAGAACAGAAAAGGCTGATGTTGTCTCATGACCACACTTTTTCCACCAGGCGTTTCCCAAGAGATGTAAATTCCATCCTCTAATCTTATTTGTCATTGCATATTAGGGCCTTACTTGTGTTTACAAACCATATTCCTCTGCACTTGATACACAAGGCTAAGAGCTATGGAATCGAATCGGAGTGAAAGCCAATCCACGCTGGAGAAAACACAGTTTGGCCTGTTAGAGAAACGGGCTGAAGCACCTCCTCTAGTATCAAGAGGGGTAACAGTATCCCTGTTAGAATGTAACTGTTTATCATGGGCTAGTGTTCGGCAGGGGCTGCCAGAGCTGTGTGTGCTAAACAATGCACTCATTCAGGCCGTCGCGCATCTGCTAGTGATCTGGGACGGGACGTCGATACGCTCTCAAGGACGACGGCCTCTGGTCCGATCCAGAGGAGAGAGGAGGTCTCGTGCCACCGTATTCTACATGTGCCATGCGTGAGAGCGAATTCACCGGTGGACTGGAGATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07761466_07761786.mRNA True 700 mRNA 0.46 1 7761432 7762131

Neighbor

gene id symbol gene type direction distance location
CI01000012_07716912_07750520 SOBPA coding downstream 10912 7716655 ~ 7750520 (-)
CI01000012_07705100_07707005 NA coding downstream 54205 7703949 ~ 7707227 (-)
CI01000012_07556881_07563284 ARG2 coding downstream 198039 7556106 ~ 7563393 (-)
CI01000012_07537907_07544112 RDH11, RDH12 coding downstream 217320 7537441 ~ 7544112 (-)
CI01000012_07504355_07506926 NA coding downstream 254506 7503460 ~ 7506926 (-)
CI01000012_07813654_07814853 NA coding upstream 50769 7812900 ~ 7814853 (-)
CI01000012_07925520_07928491 RDH14, RDH14A coding upstream 163325 7925456 ~ 7928491 (-)
CI01000012_07930029_07934648 5NT1A, NT5C1BA coding upstream 167161 7929292 ~ 7934881 (-)
CI01000012_07938822_07940632 NA coding upstream 176683 7938814 ~ 7941045 (-)
CI01000012_07956050_07959414 NA coding upstream 193856 7955987 ~ 7959414 (-)
G74381 NA non-coding downstream 66735 7693376 ~ 7694697 (-)
G74378 NA non-coding downstream 160050 7601141 ~ 7601382 (-)
G74376 NA non-coding downstream 163313 7597913 ~ 7598119 (-)
G74363 NA non-coding downstream 197433 7563722 ~ 7563999 (-)
G74113 NA non-coding downstream 415648 7345481 ~ 7345784 (-)
G74477 NA non-coding upstream 71231 7833362 ~ 7836466 (-)
G74490 NA non-coding upstream 93168 7855299 ~ 7855653 (-)
G74492 NA non-coding upstream 107253 7869384 ~ 7869615 (-)
G74498 NA non-coding upstream 136486 7898617 ~ 7898858 (-)
G74500 NA non-coding upstream 140849 7902980 ~ 7903181 (-)
CI01000012_07356934_07358497 NA other downstream 402887 7356863 ~ 7358612 (-)
G72629 NA other downstream 1613938 6147011 ~ 6147494 (-)
G72294 NA other downstream 2295575 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 2344652 5413369 ~ 5416780 (-)
G72204 NA other downstream 2459226 5293773 ~ 5302206 (-)
G74648 NA other upstream 502198 8264329 ~ 8265654 (-)
G74701 NA other upstream 604888 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1305775 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1309240 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1320605 9081877 ~ 9083489 (-)

Expression


Co-expression Network