acot11 (acot11)


Basic Information

Item Value
gene id acot11
gene name acot11
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 541500 ~ 569439 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678609.1
TAAGGCAGTGGGAGGAGCTTACAGGGCTGCAAGGTTGATACAGTGTTGAAAGTTTGTGTTGAGTTTGATTGAGTTCAGTTTCCGCTGATCTGATCAGTAATGATCGATATGATCGACAGGTATCAGATCTGATCACCTGCTGCTGAAGAAAAGAGGCGTGGCGTTTGTCCACCTGGTCCACCATGGCGTCAGACAGCAGCAGTCCACAGATGGTGTTTGATGAGCCGGAGGTGATCATGGAGGACGGGCAGGTGTACCGTAACCCGACGGAGGTGAAGATGAGCCAGATAGTGCTGCCGTGCCACGCCAACCACCGTACAGAACTCAGCGTCGGTCAGCTGCTCAAGTGGATGGACTCCACCGCCTGCCTGTCCGCGGAGCGACACGCTGGATGCTCCTGTGTAACGGCTTCTGTAGACGACATCCTCTTTGAGCGCACCATCAGTGTTGGACAAGTGGTGAATATCAGGGCTAAAGTGAACCGGGCTTTTAACACCAGCATGGAGgttggTGTAATGGTGAGCTGTGAGGATTTATATAGGAACAGCCACTGGAAGGTCTGCCAGGCCTTCGCCACGTTCGTAACTCGAACCACCGGAACAGAGAAGGTGCACCTGAAGCAGCTGGTGCCgttcactcagagagagcaggtGGAGTACAGCGTGGCGGCGGAGCGGCGCAGGATGAGGTTACTGCACGTCGACATCATGAAGGACCTGCTGAACAGCACCACCTTCCAGAGGAGCATCGATGAGGACGACGGAGACGGTCAGGATGAAGAGAAGGAAGTCTCCACAGAGAAAACCCGAGTGGAGAGTGTAGAGCTCGTACTGCCGCCTCACGCCAACCACCAGGTCAGCACGTTCGGGGGTCAGATCATGGCCTGGATGGAGAACGTCGCCACCATCGCTGCCAGCCGTCTGTGTAACGCCCATGCCACCCTGAGGGCCATCGACATGTTCCACTTCAGAGGCCCCTCCCAGGTGGGAGACCGTGTGATCCTGAGGGCCATCGTTAATAACACCTTTAAGAACAGTATGGAGGTGGGCGTGTGTGCGGAGGCGTATATGGGGGAGGAGCCTCAGAGACACATTAACAGTGCGTTTATGACGTTTGAGGTGCTGGATAAGGACGGGTCGCCACGCCTGCTCCCCCCAATATCCCCCGAACCCAAGGATGGAAAGAGGAGATTTCAAGAAGCTATCGCCAGAAAGAAGATCAGACTGGACAGAAAATACATCATCTCctgtaaacacactgaaatgccTCTATCTGTCCCCTGGGACCCCAGCAACCAGGTGTATCTCAGCTACAATAACGTGATCGCGCTGAAGATGCTGGCGGCCAAAAACAAGTGGGTTCTCAGCTCTAAGAAGAACAACGTGAAGCTGTTCACTCTGGAGGAGAATCAGACGCTGAGTTTTCGGGTTGAGTCTGAGGTGAATGTTCCAGCAGCTCGAGTGTTTCTCCTGCTCTCCGATCTCAACCGCAGACCAGAGTGGGATAAAAACTACCAcAGGCAGTGTGAGCCGGTGGTGAACGTGGATGAGGATGATGTGATCTATCGGGTGGTCACTCGTTCGGTCAGTGCGGGGGGGAGAGAGCAGGACTTTATCCTGCTGGCCTCCAGGAGAGCGCCCTGCGACCGCGGAGACCCGCATGTGATTGCCCTGCGCTCCGTCACCCtccccacccacccccccaccGACTGCTTCACCCGCGGGGAGACGCTCTGCGCCGGGTTCACCATCCACCAGCTCTCCCCCTCCGCCTGCAGGattaattattataatcagACGAGTCCGGGGGTGGTGCCGTACATCGCCGCCGACATCGCCGGCCTGTCCTCCAGCTTCTGCTCCATCTTCCTCTCCTGCCACCAGTTCCTGATGAAGAACAGAACCGGGAGCTCCGAGTCCTCCAGCACCGCCCTGTAGAGCCCAGCTCCTCCACTACtgcattaatatattaatatatacattaatatatattaatacagaTTATACTGTATTAGAGTACAACACTAGACGGGTGATTCGGGCATTAGTGTCATTTAATATGGGAAAATGGTACTTTTTTATTAGgagaaatattaatttttactaaatctttaaaaatagaTTTGTTTACATATTACTTATAGTGatgatgtgtgagtgtgtgtaagtgtgtaaatatcatacattttaaaaacgacCCAGATGCAAATTATTAtgttttgatgtatttttttttattagcttttaaattattacaaattaaGTAATAAAATCAGCAATATTTATATTGCAAAttataatgacttttttaatagaatataatacaacaaaacacaataaattaaaaatacacagaaata
>XM_022678610.1
ATGGCGTCAGACAGCAGCAGTCCACAGATGGTGTTTGATGAGCCGGAGGTGATCATGGAGGACGGGCAGGTGTACCGTAACCCGACGGAGGTGAAGATGAGCCAGATAGTGCTGCCGTGCCACGCCAACCACCGTACAGAACTCAGCGTCGGTCAGCTGCTCAAGTGGATGGACTCCACCGCCTGCCTGTCCGCGGAGCGACACGCTGGATGCTCCTGTGTAACGGCTTCTGTAGACGACATCCTCTTTGAGCGCACCATCAGTGTTGGACAAGTGGTGAATATCAGGGCTAAAGTGAACCGGGCTTTTAACACCAGCATGGAGgttggTGTAATGGTGAGCTGTGAGGATTTATATAGGAACAGCCACTGGAAGGTCTGCCAGGCCTTCGCCACGTTCGTAACTCGAACCACCGGAACAGAGAAGGTGCACCTGAAGCAGCTGGTGCCgttcactcagagagagcaggtGGAGTACAGCGTGGCGGCGGAGCGGCGCAGGATGAGGTTACTGCACGTCGACATCATGAAGGACCTGCTGAACAGCACCACCTTCCAGAGGAGCATCGATGAGGACGACGGAGACGGTCAGGATGAAGAGAAGGAAGTCTCCACAGAGAAAACCCGAGTGGAGAGTGTAGAGCTCGTACTGCCGCCTCACGCCAACCACCAGGTCAGCACGTTCGGGGGTCAGATCATGGCCTGGATGGAGAACGTCGCCACCATCGCTGCCAGCCGTCTGTGTAACGCCCATGCCACCCTGAGGGCCATCGACATGTTCCACTTCAGAGGCCCCTCCCAGGTGGGAGACCGTGTGATCCTGAGGGCCATCGTTAATAACACCTTTAAGAACAGTATGGAGGTGGGCGTGTGTGCGGAGGCGTATATGGGGGAGGAGCCTCAGAGACACATTAACAGTGCGTTTATGACGTTTGAGGTGCTGGATAAGGACGGGTCGCCACGCCTGCTCCCCCCAATATCCCCCGAACCCAAGGATGGAAAGAGGAGATTTCAAGAAGCTATCGCCAGAAAGAAGATCAGACTGGACAGAAAATACATCATCTCctgtaaacacactgaaatgccTCTATCTGTCCCCTGGGACCCCAGCAACCAGGTGTATCTCAGCTACAATAACGTGATCGCGCTGAAGATGCTGGCGGCCAAAAACAAGTGGGTTCTCAGCTCTAAGAAGAACAACGTGAAGCTGTTCACTCTGGAGGAGAATCAGACGCTGAGTTTTCGGGTTGAGTCTGAGGTGAATGTTCCAGCAGCTCGAGTGTTTCTCCTGCTCTCCGATCTCAACCGCAGACCAGAGTGGGATAAAAACTACCAGCAGTGTGAGCCGGTGGTGAACGTGGATGAGGATGATGTGATCTATCGGGTGGTCACTCGTTCGGTCAGTGCGGGGGGGAGAGAGCAGGACTTTATCCTGCTGGCCTCCAGGAGAGCGCCCTGCGACCGCGGAGACCCGCATGTGATTGCCCTGCGCTCCGTCACCCtccccacccacccccccaccGACTGCTTCACCCGCGGGGAGACGCTCTGCGCCGGGTTCACCATCCACCAGCTCTCCCCCTCCGCCTGCAGGattaattattataatcagACGAGTCCGGGGGTGGTGCCGTACATCGCCGCCGACATCGCCGGCCTGTCCTCCAGCTTCTGCTCCATCTTCCTCTCCTGCCACCAGTTCCTGATGAAGAACAGAACCGGGAGCTCCGAGTCCTCCAGCACCGCCCTGTAG

Function

symbol description
acot11 Enables long-chain acyl-CoA hydrolase activity and palmitoyl-CoA hydrolase activity. Predicted to be involved in several processes, including acyl-CoA metabolic process; negative regulation of cold-induced thermogenesis; and response to cold. Located in cytosol and mitochondrial matrix.

NR:

description
PREDICTED: acyl-coenzyme A thioesterase 11 isoform X1

GO:

id name namespace
GO:0008289 lipid binding molecular_function

KEGG:

id description
K12417 ACOT11; acyl-CoA thioesteraes 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678609.1 True 2359 mRNA 0.50 16 541500 569439
XM_022678610.1 False 1752 mRNA 0.57 15 544098 569017

Neighbor

gene id symbol gene type direction distance location
mrpl37 mrpl37 coding upstream 70383 458776 ~ 471117 (+)
tceanc2 tceanc2 coding upstream 94832 440863 ~ 446668 (+)
glmn glmn coding upstream 128910 390978 ~ 412590 (+)
LOC103029320 LOC108436061 coding upstream 184246 338177 ~ 357254 (+)
LOC103031862 NA coding upstream 207482 285164 ~ 334018 (+)
tyw3 NA coding downstream 41800 611239 ~ 616353 (+)
lhx8 lhx8,lhx8a,LOC108436043,LOC107693563 coding downstream 110760 680199 ~ 696695 (+)
trnav-aac_10 NA coding downstream 413255 982694 ~ 982766 (+)
LOC103028630 NA coding downstream 421645 991084 ~ 1053935 (+)
LOC103022131 LOC108280703 coding downstream 552576 1122015 ~ 1192644 (+)
G148348 ssbp3 non-coding upstream 2276 492284 ~ 539224 (+)
G148339 NA non-coding upstream 67305 473221 ~ 474195 (+)
G148330 NA non-coding upstream 83442 441948 ~ 458058 (+)
G148325 NA non-coding upstream 120385 420797 ~ 421115 (+)
G148323 NA non-coding upstream 135903 403080 ~ 405597 (+)
G148381 NA non-coding downstream 172120 741559 ~ 743791 (+)
G148399 impad1 non-coding downstream 382997 952436 ~ 955851 (+)
G148397 NA non-coding downstream 396630 966069 ~ 968126 (+)
G148407 NA non-coding downstream 407590 977029 ~ 981096 (+)
G148426 NA non-coding downstream 517367 1086806 ~ 1142532 (+)
LOC103021490 LOC103021490 other downstream 625096 1194535 ~ 1197577 (+)
G148442 NA other downstream 630846 1200285 ~ 1205400 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other downstream 1434160 2003599 ~ 2193725 (+)
G148599 NA other downstream 1543234 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 1724193 2293632 ~ 2403354 (+)

Expression


Co-expression Network