tyw3


Basic Information

Item Value
gene id tyw3
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 611239 ~ 616353 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678612.1
GAAGCGTGtttttagcttagcttactAAAAGCTAATTGATAACTGCAGCTCCCTCCCTgagttaaacattaaataaagtaaaaactacGGATTTAAAGCGTGATTTGTCGCTGTTATCCGCATGTTAGGAGATGGAGGAGGGTAATTTATTTAAGCAGTGGAagaaacagtgtttaaataagCTGGATTTGAGTAAAAAGGGCAGTATAGACAGAGATATCTCTCATGTGGTTTCGCTTCTAAATGATTCggattattattttactacaaGCTCCTGCTCTGGAAGAATAATTCTGATTGATGGGGTGTCAGACTGCACGGACGTACAGAAGCAGAACTGCTCCTGGTTATTCGTCACTCATGAGAAGTGTCAGAAAGAGGATGTGATAACAGCTTTGGAGAAATCTTCAGGAGATGCCGTGTTTAAGTTTGAGCCGTGTGTTCTTCACGTTCAGTGCAGACAGCTGGAGAACGCTCAACTCCTGCACTCTGTGGCTATAAACTCGGGTTTTAGGAACTCTGGAGTGACGGTGGGCAAAAAAGGCAAAACTATTATGGCGGTGCGCAGCACTCACTGTCTGGAGGTTCCTCTCAGCCGCAGGGGTCGAGTTCTGGTTTCTGAAGAATACATAGAGTTTATTGTTGAAACTGCAAATAACAAGATGGAAGAAAATCTCAAACGAATAGAaagGTTCTACGATTGTTTGAGAGCTGCACTGGATCCAGAGCAGGTTAATAAAAGCTGTTTAACAGAAGAACAGACGCAGAAGAAGCCGGTTTACAGACGCAGGAGGAAAAGAGCAGAGCGGGAGCGTCCTGATTCAGACTGTGGGCTCCAGAATCAGAGTGAAAATGAGCAGCAGGATGATCTGGACTCTGAACTgacattatttaattaatattaatcacTCCTGTGCTTCTATTGAAGGATTTACAGTATACATGATctgttttatatcagttttggACTTGGTATACCAGAATTTAAGGCTGAACTGGTGAGTTTGGGGActcaaaacaaacacatttcatGTATCTCTAACTAGGAAATAATTTCGCATCAAACCTACtgttaatgctttttttatgattaatttatgcagaaataaataatattttttaaa

Function

NR:

description
tRNA wybutosine-synthesizing protein 3 homolog

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016740 transferase activity molecular_function

KEGG:

id description
K15450 TYW3; tRNA wybutosine-synthesizing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678612.1 True 1124 mRNA 0.40 6 611239 616353

Neighbor

gene id symbol gene type direction distance location
acot11 acot11 coding upstream 41800 541500 ~ 569439 (+)
mrpl37 mrpl37 coding upstream 140122 458776 ~ 471117 (+)
tceanc2 tceanc2 coding upstream 164571 440863 ~ 446668 (+)
glmn glmn coding upstream 198649 390978 ~ 412590 (+)
LOC103029320 LOC108436061 coding upstream 253985 338177 ~ 357254 (+)
lhx8 lhx8,lhx8a,LOC108436043,LOC107693563 coding downstream 63846 680199 ~ 696695 (+)
trnav-aac_10 NA coding downstream 366341 982694 ~ 982766 (+)
LOC103028630 NA coding downstream 374731 991084 ~ 1053935 (+)
LOC103022131 LOC108280703 coding downstream 505662 1122015 ~ 1192644 (+)
LOC103027172 NA coding downstream 785670 1402023 ~ 1413005 (+)
G148348 ssbp3 non-coding upstream 72015 492284 ~ 539224 (+)
G148339 NA non-coding upstream 137044 473221 ~ 474195 (+)
G148330 NA non-coding upstream 153181 441948 ~ 458058 (+)
G148325 NA non-coding upstream 190124 420797 ~ 421115 (+)
G148323 NA non-coding upstream 205642 403080 ~ 405597 (+)
G148381 NA non-coding downstream 125206 741559 ~ 743791 (+)
G148399 impad1 non-coding downstream 336083 952436 ~ 955851 (+)
G148397 NA non-coding downstream 349716 966069 ~ 968126 (+)
G148407 NA non-coding downstream 360676 977029 ~ 981096 (+)
G148426 NA non-coding downstream 470453 1086806 ~ 1142532 (+)
LOC103021490 LOC103021490 other downstream 578182 1194535 ~ 1197577 (+)
G148442 NA other downstream 583932 1200285 ~ 1205400 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other downstream 1387246 2003599 ~ 2193725 (+)
G148599 NA other downstream 1496320 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 1677279 2293632 ~ 2403354 (+)

Expression


Co-expression Network