CI01000012_07938822_07940632


Basic Information

Item Value
gene id CI01000012_07938822_07940632
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7938814 ~ 7941045 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07938822_07940632.mRNA
ATTCACCATTGCAGTGTCATCATGTGCATTATTCAGACAAGAGACAGGGGATATCTATTTTAAAGGAGCTGCTTTTCCATTTGTCAAGGTAACAGAATTTCAGTGAAATATATTTTCCTCTATATATTAACATGCAGCTTATTCTCCCTTGTTAATCAATAATGCATTTACTTTTACCTGTAAACCCAGTTTAGAAACGAAAAGGTCGTTTGTAATTCACTAATACTAATATTAAACATTTAAGCAAAGAGGAAGTTTTTCATATCATGTGCATCTATTTTCACTGAGAATTCAGTACTGTAACTTGGTTATAACTAGCAAGAATCCCCAAAGATTAAGTCCACTAATTTGTTTAATTTGACATAGGTGTTAGTATTTAGTGTATTTTGATCACTCTGCACTAGGCTCTTACAATGGTGAATCAACGTTTGACTGAGCTGGACCAAGCCACTGAAGAGCGGTTTAAAATTGTGCTGATACCTTCTGATGGTCAGGACATTGATCACCTGACCAAGAACATTAAAAAATACGGGCTGAAAATTGACAGTCTCTGTGAAATTACTCGTAAAAAAACCCACCTTTATCATCTTAATGAGATCAAGCCTGTTCTCTACCTGTCCACAAACCCACAGAATGTGAAAAAGGCCATCAGTGAAGGACATGGAGCAGCCACAATGTTCCAGAGAGAGTACCACGAGCCCAGTGATGAAGTGTTACGTCTGGCCTTTGATGGTGATGGAGTCCTGTTTTCAGACGAGTCAGAGAGAGTCTACAAAGAGAAAGGGCTACAAAGTTTCTATGATAATGAACGTGATAAGGAGGATGAACCTTTAATACAGGGCCCACTAAGTAAGTTTTTTCAAGCATTGGTACATCTCCAGCAGAAATTCGGTCTGCAAAATTGTCCGATTCGTACCTACTTGGTAACATCACGTGGCACATCAAGTCCTGGATTAAGAGCCCTGAAGACTCTTCAGAGGGATAAGCTGGAGATAAATGAGGCATTCTTTCTGTGTGGTGCCCATAAAGGGCCTGTGCTGAAAGCAATCAAACCTCACATTTTCTTTGACGACCAGACTCCACACGTTGACGGAGCCCTTCAAAATGGGGTTATTGGTGCTCATGTACCTTATGGTGTGAGAAATGAGTGAGAATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07938822_07940632.mRNA True 1159 mRNA 0.40 4 7938814 7941045

Neighbor

gene id symbol gene type direction distance location
CI01000012_07930029_07934648 5NT1A, NT5C1BA coding downstream 3933 7929292 ~ 7934881 (-)
CI01000012_07925520_07928491 RDH14, RDH14A coding downstream 10323 7925456 ~ 7928491 (-)
CI01000012_07813654_07814853 NA coding downstream 123961 7812900 ~ 7814853 (-)
CI01000012_07761466_07761786 NA coding downstream 176683 7761432 ~ 7762131 (-)
CI01000012_07716912_07750520 SOBPA coding downstream 188294 7716655 ~ 7750520 (-)
CI01000012_07956050_07959414 NA coding upstream 14942 7955987 ~ 7959414 (-)
CI01000012_08156754_08159438 OSR1 coding upstream 215024 8156069 ~ 8159438 (-)
CI01000012_08247043_08252830 NA coding upstream 305372 8246417 ~ 8252958 (-)
CI01000012_08376626_08388293 HIF1AA coding upstream 435573 8376618 ~ 8388293 (-)
CI01000012_08399430_08416750 PRKCHA coding upstream 456721 8397766 ~ 8417291 (-)
G74508 NA non-coding downstream 1376 7937202 ~ 7937438 (-)
G74504 NA non-coding downstream 32393 7906157 ~ 7906421 (-)
G74502 NA non-coding downstream 34421 7904148 ~ 7904393 (-)
G74501 NA non-coding downstream 35185 7903296 ~ 7903629 (-)
G74500 NA non-coding downstream 35633 7902980 ~ 7903181 (-)
G74546 NA non-coding upstream 104479 8045524 ~ 8045744 (-)
G74547 NA non-coding upstream 106263 8047308 ~ 8047528 (-)
G74548 NA non-coding upstream 109469 8050514 ~ 8050726 (-)
G74553 NA non-coding upstream 116122 8057167 ~ 8057394 (-)
G74556 NA non-coding upstream 129431 8070476 ~ 8070696 (-)
CI01000012_07356934_07358497 NA other downstream 580269 7356863 ~ 7358612 (-)
G72629 NA other downstream 1791320 6147011 ~ 6147494 (-)
G72294 NA other downstream 2472957 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 2522034 5413369 ~ 5416780 (-)
G72204 NA other downstream 2636608 5293773 ~ 5302206 (-)
G74648 NA other upstream 323284 8264329 ~ 8265654 (-)
G74701 NA other upstream 425974 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1126861 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1130326 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1141691 9081877 ~ 9083489 (-)

Expression


Co-expression Network