CI01000012_07956050_07959414


Basic Information

Item Value
gene id CI01000012_07956050_07959414
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7955987 ~ 7959414 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07956050_07959414.mRNA
GGCCCACTAAGTAAGTTTTTTCAAGCCTTGGTACAACTCCAGCAGAAATTCGGTCTGCAAAATTGTCCGATTCGTACCTACTTGGTAACATCACGTGGCACATCAAGTCCTGGATTAAGAGCTCTGAAGACACTTCAGAAGGAAAACCTGGAGATAAATGAGGCATTCCTTCTGTGTGGTGCCCATAAAGGGCCTGTGCTGAAAGCAATCAAACCTCACATTTTCTTTGACGACCAGACATCACACATTAAGGATGCCCTTCAAAATGGGGTTATTGGTGCTCATGTACCTTATGGTGTGAGCAATGAGTTAAGTCGAACACCGGAGAGTAAAAATAATTTCATACAAATTAGAAATAAATGTACAGCTGAACTGCGTAAGGCTAAGGAGGTCTATTTCCAACAACAGATTACTTTATCCGTTACTAACCCAAAGACGTTATGGCAGACCCTTAAAGTCATCAGCGGCGAAAATGAGAAGAAAAAGAATGTCAATATTCAAATTTCCCTACAGGGTACTCTTATCTCAGATTCAGAAAAGATTGCAAGTGCTTTTAATGATTATTTTGTATCATCTGTTAAAGAATTGGCAACCAATTTTACAACTTATTTCTTCTCACCTGTTCTCTCTCTAACACCTGATCAGTTCTCATTTTCTGAGATCTCGCAGAACGAGAACAGGAACCTGCTGGAAACCAGTTTTTAAACTGAGTCAGGCCCATTTAAATTGTACCTTAATGTTACTTTTTAACCTTTCCTGTATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07956050_07959414.mRNA True 768 mRNA 0.39 3 7955987 7959414

Neighbor

gene id symbol gene type direction distance location
CI01000012_07938822_07940632 NA coding downstream 14942 7938814 ~ 7941045 (-)
CI01000012_07930029_07934648 5NT1A, NT5C1BA coding downstream 21106 7929292 ~ 7934881 (-)
CI01000012_07925520_07928491 RDH14, RDH14A coding downstream 27496 7925456 ~ 7928491 (-)
CI01000012_07813654_07814853 NA coding downstream 141134 7812900 ~ 7814853 (-)
CI01000012_07761466_07761786 NA coding downstream 193856 7761432 ~ 7762131 (-)
CI01000012_08156754_08159438 OSR1 coding upstream 196655 8156069 ~ 8159438 (-)
CI01000012_08247043_08252830 NA coding upstream 287003 8246417 ~ 8252958 (-)
CI01000012_08376626_08388293 HIF1AA coding upstream 417204 8376618 ~ 8388293 (-)
CI01000012_08399430_08416750 PRKCHA coding upstream 438352 8397766 ~ 8417291 (-)
CI01000012_08423495_08432094 SLC38A6 coding upstream 463390 8422804 ~ 8432094 (-)
G74508 NA non-coding downstream 18549 7937202 ~ 7937438 (-)
G74504 NA non-coding downstream 49566 7906157 ~ 7906421 (-)
G74502 NA non-coding downstream 51594 7904148 ~ 7904393 (-)
G74501 NA non-coding downstream 52358 7903296 ~ 7903629 (-)
G74500 NA non-coding downstream 52806 7902980 ~ 7903181 (-)
G74546 NA non-coding upstream 86110 8045524 ~ 8045744 (-)
G74547 NA non-coding upstream 87894 8047308 ~ 8047528 (-)
G74548 NA non-coding upstream 91100 8050514 ~ 8050726 (-)
G74553 NA non-coding upstream 97753 8057167 ~ 8057394 (-)
G74556 NA non-coding upstream 111062 8070476 ~ 8070696 (-)
CI01000012_07356934_07358497 NA other downstream 597442 7356863 ~ 7358612 (-)
G72629 NA other downstream 1808493 6147011 ~ 6147494 (-)
G72294 NA other downstream 2490130 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 2539207 5413369 ~ 5416780 (-)
G72204 NA other downstream 2653781 5293773 ~ 5302206 (-)
G74648 NA other upstream 304915 8264329 ~ 8265654 (-)
G74701 NA other upstream 407605 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1108492 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1111957 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1123322 9081877 ~ 9083489 (-)

Expression


Co-expression Network