CI01000012_08234924_08239665


Basic Information

Item Value
gene id CI01000012_08234924_08239665
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8234759 ~ 8239885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08234924_08239665.mRNA
CTTTAAAAACAAGCATGATCTCATGCTCTTTTCTTCAGAGAAGACCAATACAGGGCTGTCACACAGACAGGAATCACTGCAGGGGGTTCAGAGGACATCCATGAGTCACTGTAATCAACACACAACAGACTCTGCCATGATGTCACCTTTAGTTTCAAGACCGATATGAGAGGCGCTGATGCTCTTGTTATTTGGGTTGTTATGCTGTGCTTGGATGGGAAACAGCAGTATTCTGAGGAATGGAGAGATGAAGGGAAGACACATGTTAGAGTAATCTCTTCGTCTCTCTCTGTGAATTACGAGCTCTCTTTCTTTCGTTCGTTCTCTCTTTCTTGCATTGAAGTCACAAAAATGGGAGCGTTTCTTGAGATTTCATCCAACAGTAGCAACGAGAGGGAAAATACCCTGTTATTTCCAAATGCAGCAATGAGCGTGACGAATTGTCCATTTTCCACAAGCAGAGCTGGAAAGAGAGAGAGAAAGAGTAGATTTGGACCAGGGTCTTTGCTCCTTCTCTGCATGGGCTCTCAGCGGGTGGTGACACAGACAAAGACTCCTGCAGCTTTAACACCTTCTGTGGCTCTTCAGGAGAACCAGGAGGTATTTTGTACCCCTGCACCTGCTGGCTGAAAGGTAAACATTGCATTTTCCATTGTGTATTTTTTATTTAAGAGTCTCAATCACTGCCCTCCCCTTAGCCTGTCTACACAGGACATCGGGCTATAAGCAAATGATGTGATTCACCGCTTATTTAAAAGGACCACTGCAATCCAAACAGCCTTAAGCTATGGTATGAATTAACTGTTTGAAGTTGGTTGATTCTTACATTTCCATTAACATCATCAATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08234924_08239665.mRNA True 850 mRNA 0.43 5 8234759 8239885

Neighbor

gene id symbol gene type direction distance location
CI01000012_08159919_08162280 NA coding upstream 72423 8159607 ~ 8162336 (+)
CI01000012_07847662_07849170 KCNS3A coding upstream 385025 7846544 ~ 7849734 (+)
CI01000012_07822979_07844745 WDR35 coding upstream 389199 7822410 ~ 7845560 (+)
CI01000012_07817578_07821568 NA coding upstream 412736 7817578 ~ 7822023 (+)
CI01000012_07812015_07812349 BEND3 coding upstream 422106 7812015 ~ 7812653 (+)
CI01000012_08264407_08270366 DIEXF coding downstream 24117 8264002 ~ 8270828 (+)
CI01000012_08307719_08308987 NA coding downstream 67834 8307719 ~ 8309221 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding downstream 73018 8312903 ~ 8334856 (+)
CI01000012_08353036_08355661 NA coding downstream 110944 8350829 ~ 8357504 (+)
CI01000012_08433577_08437269 TRMT5 coding downstream 193692 8433577 ~ 8437972 (+)
G73537 NA non-coding upstream 31592 8202862 ~ 8203167 (+)
G73522 NA non-coding upstream 81570 8152928 ~ 8153189 (+)
G73507 NA non-coding upstream 100540 8134012 ~ 8134219 (+)
G73493 NA non-coding upstream 113553 8120969 ~ 8121206 (+)
G73471 NA non-coding upstream 135640 8098708 ~ 8099119 (+)
G73571 NA non-coding downstream 37510 8277395 ~ 8277583 (+)
G73576 NA non-coding downstream 125718 8365603 ~ 8365925 (+)
G73579 NA non-coding downstream 128737 8368622 ~ 8369011 (+)
G73583 NA non-coding downstream 134142 8374027 ~ 8374232 (+)
CI01000012_07806089_07811902 BEND3 other upstream 426904 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2310454 5922385 ~ 5929186 (+)
G71623 NA other upstream 2418154 5813517 ~ 5816605 (+)
G71548 NA other upstream 2673326 5550493 ~ 5561433 (+)
G71221 NA other upstream 2694303 5538525 ~ 5540456 (+)
G73578 NA other downstream 126921 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 1982070 10223697 ~ 10236276 (+)
G75533 NA other downstream 2904932 11144817 ~ 11145739 (+)
G76385 NA other downstream 4390870 12630755 ~ 12675666 (+)
G76374 NA other downstream 4505646 12745531 ~ 12749169 (+)

Expression


Co-expression Network