CI01000012_08264407_08270366 (DIEXF)


Basic Information

Item Value
gene id CI01000012_08264407_08270366
gene name DIEXF
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8264002 ~ 8270828 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08264407_08270366.mRNA
ATTTTAAAGGCACTAATCATATTGTGGCAGAACATGTACTAACATAACAGTGAGAAAATCTCAAAATGAAGTGAAAGATAAACCAATGACATGATTATTTTGCTTTGGCAGGTGCTAAAACATCATTGAATCAGGCCAACTGAGTGCTTGTTCTATAATTCCTGTGTGTTCAGTAATCCGGTCTGTGTTTGTGGAAGCAATTGAAATGATAAAACCTATTATTAAAATGTTTATTTTAATTTTTGGATTGATTTTTTTTTTTTCAGCAGAATATTTGCAATCTGTGGTTTCTTTCTCGCTCTACTGATTTTTATTCCAAGCCGACAGGTGGCGACAGAGTGTGGTGACACGCTAACTATTCGTGAAGAAAACACAAGCGCGAGCACACGTGTGTAAAACAGAAACATGGGCAAAAGAAGGCGAGGAAAAGAAGAGGTTACAAATTTAACTAAGAAACAGAAGAAACATCTAAAAGAATTTGGAGAACAGCACCCTTTTCACGATAATGTCGTTGATAGACCGGAGAAGACTCAGATTGTGCGCTTGCGGCCGGACAGTCCGCAGCGCCCTGAACCTGACAGTGAGGAAGACAGTGATATAGAGCAGCAGTCTGCTTATCAGAAACTGCTGTCCACCATGATCCAAGGTGCTGATGACAACAGTGAAGATGAAGAAAGTGAAGATGAGGATGACGGAGAGGAGGTTGAAGGAGAGATTGGTGGAGAAGAAGAGGAGGAGGAAGGTGATAATGCTGAAGAAGATTTAGAGGAAGAGGAGGGTGAAACACCTGGCGATTCACAAGATAAAGAACACCCTGAAAAGACAAATGGAGATGTAAAGGAGAATGAAAAGGGAGAGATGGAAGGAGAGTTTACAGATAAGAATGAAGGTGCGTTCTGTCTGGAAACCAACCTGCCTGCAGAAGAGGAGGAAAACATGGTAGAGCAGGAACAGGAGGAAGACATGTTTGTGAAGCACCAGGAGATTGAACTGAATGAAGATGAAGTGGGCCAAATCTTGCAAGGATCAAAGATCAAGACTCAGGTTAAGTGGCCAAAGCTAGGTGTTCTGCAATGTGTGAGTCCACTGGAACGTTTCCCAACCGTGGGTCAGCCCTCATCTGCCCCTATTCCACCCATTCACAAAACCCTGGAGGCGAATTGGCACTTGCTAAACCAGCCCTTCGGACCTGAAGAAGGTGCTGTGACAGATGTCACAGAGCTGCAGAAGGAATTGCTTGGGCTTATGGGTACTTACAGGGATGTGTATTTTACAAACTGCTCCCCTTTGAGGGAGGCTAAGGAAGTACGGAGTGCGTACTGTCTTCATGTGCTGAACCACGTGTTGAAGGCAAACACTCGTGTGCTTATAAATAATGCCAAGTTGAAGGAAACTAAAGATGTGAATGAGGATTTTCGGGATCAGGGCTTAACTAGACCAAAGGTTTTGATTCTGGTGCCGTTCAGAGATGGAGCGCTGCGAGTCGTCCAGACCTTCATAAAACTATTGGAGCCCAAAGACAGGAAGATGAACGTCAGTAGCAAGAAGCGATTTAAGGAAGAGTTTGGAGAGGAGCCAGGTGAAAGGCCACCTAACCTGCAAAGACCTGACGACTATCATGCTGTCTTTTCGGGAAATGTGGATGACCATTTCAGGATAGGTGTGTCTATCCTGAAACGCAGCATTCGTCTCTATGCTCCGTTCTACTCCTCTGACATTATCATTGCGTCTCCACTGGGTCTGCGCACAGTTCTGGGTGCCGACGGTGAGAAGAAGAGAGAATTTGACTTTCTGTCTTCGATTGAACTTCTGATTGTGGATCAGGCGGATGTTTTCCTCATGCAGAACTGGGAACACTTGCTGCATGTGTTGAAGAATTTGAATCTGCAGCCGTTGGACTCTCACGGTGTTGATTTCTCTCGTGTGCGCATGTGGAACCTGAACAACTGGACAGCACATTACAGACAGACGCTGGTGTTCAGTGCCATACAAGAGCCTCAGATCACCAACATCCTTACCAAACACTGCCACAACTACAGGGGACAGGTGTGCAGTAAAACCATTCCAAAGGTGGGCTCAATCTGTCAGGTTCTCGTGCAGCTACCACATGTATTCCAGATGTTTCACTCTGACAGCTTCATGGACCAGGACGCCAGGTTCCAGTTCTTTGTGGATAAGATCCTGCCTCAGTACAGAGACTCTGTTATGTCCCACACTTTCATCTATGTGCCTTCGTACTTTGATTTTGTTCGCCTGCGAAACTACCTGAAGAAAGAAGACATCAGTTTTGCTAGTGTCAGCGAGTACTCGCAGAGATCAGAGGTGTCTCGAGCACGACATTACTTCCAGAAAGGAGAAAAACAGTTTATGCTTTTCTCTGAGAGATTCCACTTCTACAAGAGATACACGATCAAGGGCATCCATAACCTGATCTTCTACGGGTTGCCCACATACCCTCACTTCTACAGTGAAGTGTGCAATATGCTTCAGGCTGGTGTCAGAGAGGGTGGTGGTTCTGTCAGCTTCACCTGCACGGCCCTGTACTCCAGATATGACATGCACCGGCTGGCTGCCATCACTGGGGCCGACCGCGCCGCTCAGATGCTCCAGTCCAAAAAACCAGTACACCTTTTCATCACAGGGGAGGAGAAAAACACATGAAGGGGGACTGTGAAAATTTAATGTGACATTTCTAATCTTTCAGAGAAAAAACATAATCAATGTTTGTGGTAATGTTCAGAAAGATGTTTTCACTTTAATTCCCCTAAAATTCAGTCAGAAGACTGAATGTAATGATGTTATTCTTATCCTTTTGTGTTCATTTTTTAATATAAAGTCTTCTTTTGCTGTAGTCACAGCCCAAACCATTGGCTCCAATGTGTGTGTGTTATTTTTTAATTTCCAAAAGGTTTACAAGACTCAACAATAATGATGGCTTCATGCCAGTACTAATGCCGGAGATTCAGACTAGTCACCTGTCAAAAGTGCTTTTCTTACTTTGATCATGTACTGTTCATGCATTTTATACCTTTACATTCAAGAACTAAACTTTTGGTTTCTTCTTTGGTTTATTGAACGTTGTGCAGTGTGCCAAGCAACTCGCGCTGACAAGAGAGATTAGGA

Function

GO:

id name namespace
GO:0032040 small-subunit processome cellular_component

KEGG:

id description
K14774 UTP25, DEF; U3 small nucleolar RNA-associated protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08264407_08270366.mRNA True 3123 mRNA 0.44 13 8264002 8270828

Neighbor

gene id symbol gene type direction distance location
CI01000012_08234924_08239665 NA coding upstream 24117 8234759 ~ 8239885 (+)
CI01000012_08159919_08162280 NA coding upstream 101666 8159607 ~ 8162336 (+)
CI01000012_07847662_07849170 KCNS3A coding upstream 414268 7846544 ~ 7849734 (+)
CI01000012_07822979_07844745 WDR35 coding upstream 418442 7822410 ~ 7845560 (+)
CI01000012_07817578_07821568 NA coding upstream 441979 7817578 ~ 7822023 (+)
CI01000012_08307719_08308987 NA coding downstream 36891 8307719 ~ 8309221 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding downstream 42075 8312903 ~ 8334856 (+)
CI01000012_08353036_08355661 NA coding downstream 80001 8350829 ~ 8357504 (+)
CI01000012_08433577_08437269 TRMT5 coding downstream 162749 8433577 ~ 8437972 (+)
CI01000012_08464015_08470633 NA coding downstream 193187 8464015 ~ 8470764 (+)
G73537 NA non-coding upstream 60835 8202862 ~ 8203167 (+)
G73522 NA non-coding upstream 110813 8152928 ~ 8153189 (+)
G73507 NA non-coding upstream 129783 8134012 ~ 8134219 (+)
G73493 NA non-coding upstream 142796 8120969 ~ 8121206 (+)
G73471 NA non-coding upstream 164883 8098708 ~ 8099119 (+)
G73571 NA non-coding downstream 6567 8277395 ~ 8277583 (+)
G73576 NA non-coding downstream 94775 8365603 ~ 8365925 (+)
G73579 NA non-coding downstream 97794 8368622 ~ 8369011 (+)
G73583 NA non-coding downstream 103199 8374027 ~ 8374232 (+)
CI01000012_07806089_07811902 BEND3 other upstream 456147 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2339697 5922385 ~ 5929186 (+)
G71623 NA other upstream 2447397 5813517 ~ 5816605 (+)
G71548 NA other upstream 2702569 5550493 ~ 5561433 (+)
G71221 NA other upstream 2723546 5538525 ~ 5540456 (+)
G73578 NA other downstream 95978 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 1951127 10223697 ~ 10236276 (+)
G75533 NA other downstream 2873989 11144817 ~ 11145739 (+)
G76385 NA other downstream 4359927 12630755 ~ 12675666 (+)
G76374 NA other downstream 4474703 12745531 ~ 12749169 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location