CI01000012_08307719_08308987


Basic Information

Item Value
gene id CI01000012_08307719_08308987
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8307719 ~ 8309221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08307719_08308987.mRNA
TGTCTCCTGAGGCTTTGGGGTTCCTGTCTGGCATTGGCGTGTTCATCTTTCTTGTGATTGTACTCTTTCTTTACCTCAATAACAAACTGTCCCTTGAGAGTGCCAACCAACTGCCCAGCCTCGACCAGTACAGGAAGAGCACAGAAGCAGCAGACACGGTGACGTGCTGAACTGGTCGGCTTGTGATCCTCAGCACAGGACGTTGATTGGAGAGGACAGATGCCACTGGCCAATTATTAGATCAATTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAAAATGAATGAAGGGGATCATGTAACAGCCCTGAGAGAAAATCTGGGCAGAAATCCAAACACACAGGATCAAATGTCCACATTGTCAGTCTACATGCACACACACACTCACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08307719_08308987.mRNA True 404 mRNA 0.48 2 8307719 8309221

Neighbor

gene id symbol gene type direction distance location
CI01000012_08264407_08270366 DIEXF coding upstream 36891 8264002 ~ 8270828 (+)
CI01000012_08234924_08239665 NA coding upstream 67834 8234759 ~ 8239885 (+)
CI01000012_08159919_08162280 NA coding upstream 145383 8159607 ~ 8162336 (+)
CI01000012_07847662_07849170 KCNS3A coding upstream 457985 7846544 ~ 7849734 (+)
CI01000012_07822979_07844745 WDR35 coding upstream 462159 7822410 ~ 7845560 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding downstream 3682 8312903 ~ 8334856 (+)
CI01000012_08353036_08355661 NA coding downstream 41608 8350829 ~ 8357504 (+)
CI01000012_08433577_08437269 TRMT5 coding downstream 124356 8433577 ~ 8437972 (+)
CI01000012_08464015_08470633 NA coding downstream 154794 8464015 ~ 8470764 (+)
CI01000012_08479030_08480715 MGC130961, SIX1B, SIX1, SIX2, SIX1A coding downstream 167895 8477116 ~ 8481200 (+)
G73571 NA non-coding upstream 30136 8277395 ~ 8277583 (+)
G73537 NA non-coding upstream 104552 8202862 ~ 8203167 (+)
G73522 NA non-coding upstream 154530 8152928 ~ 8153189 (+)
G73507 NA non-coding upstream 173500 8134012 ~ 8134219 (+)
G73493 NA non-coding upstream 186513 8120969 ~ 8121206 (+)
G73576 NA non-coding downstream 56382 8365603 ~ 8365925 (+)
G73579 NA non-coding downstream 59401 8368622 ~ 8369011 (+)
G73583 NA non-coding downstream 64806 8374027 ~ 8374232 (+)
G73585 NA non-coding downstream 77066 8386287 ~ 8391810 (+)
CI01000012_07806089_07811902 BEND3 other upstream 499864 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2383414 5922385 ~ 5929186 (+)
G71623 NA other upstream 2491114 5813517 ~ 5816605 (+)
G71548 NA other upstream 2746286 5550493 ~ 5561433 (+)
G71221 NA other upstream 2767263 5538525 ~ 5540456 (+)
G73578 NA other downstream 57585 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 1912734 10223697 ~ 10236276 (+)
G75533 NA other downstream 2835596 11144817 ~ 11145739 (+)
G76385 NA other downstream 4321534 12630755 ~ 12675666 (+)
G76374 NA other downstream 4436310 12745531 ~ 12749169 (+)

Expression


Co-expression Network