CI01000012_08686460_08701212


Basic Information

Item Value
gene id CI01000012_08686460_08701212
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8686460 ~ 8701212 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08686460_08701212.mRNA
CCCAATGTTACGAATGTCCTTCATTGTCTTCTCAACTCGTGGAACCACGATTATGAGACTCACAGAGAACAGGCGCAGAGAGCTCGGTCTTTGGGAGCCATTGTATACTGCGTGGGTGTAAAAGACTTTAATCAGACACAGCTGGCCACAATTGCAGACACCATAGAGCATGTGTTCCCTGTTATTGGAGGATTCCAGGCCCTTGAAGGAATGATAGACTCTATTATCAAGAAATCCTGCATTGAAATTTTAGCAGCCGAGCCATCCAGTGTATGTGCTGGTGAGCTAATCCGCCTCTTCGCATCACCAGGGAGACGGCGCTGTAAGTGCACTCTCGCGCATGTGCTGTGGAGGCAGTTCCAGTGCCTGACAGTCTCAGCGATCAAACTGATGAGAAGTGACCAGCCCGTGCAGCCTGCAAACAGGCCATCACTCGCTGTTCTGAGAGGAGGCCCAGCCATCAAACAACCCGACACACCATGTCTGACAGTAACGCGGGAAGAAAAGGACATGGATGTTGATGCCCGGCCTCCAAAATTAAATGGAATTAGCCATTTCAGCTGTATGGACGTCACATTAAGCAGGCATGAGCAAGAGAGCTGGGCAAATTTAGACGCAGAGAGATCTCAGAGTCTGGGTCTCTCAAAAGTCAGCCAGATGTGGGTGATATATCTGCAGGTTAGCATGAACGAGGGTTTGTCCTACATCACAAGCTCAGTGCACATCACTACTGCTGAATGTTTTGATGGGACCATCCTGCTCATCTCGTTACTGGCTGTTTTCCTGTTGTTGGGTTTGGTGCTGATGTGGTGGTTCTGGCCTCTGTGCTGTACAGTGGAGCCTGATGATGAAGATGGCATGCCTAAAAAGAAATGGCCTACAGTAGATGCATCCTACTATGGCGGAAGAGGAGTTGGTGGAATCAAAAGAATGGAGGTGCGCTGGGGGGACAAGGGCTCCACGGAGGAAGGAGCTAAACTGGAGAAGCCAAAGAACGCTGTGGTGAAAATGCCTGAGGACGAATATGAGCCCTATGAACCCAAACTCAGAAAGCCTTATGGGCGCAGACCTGCCCATCACAGAAAGTGGTACAGTCCTATTCAGGGGAAACTGGATGCTTTGTGGGCCCTTTTCCGTCGAGGATACGACCAGGTGTCACTCATGAGACCCCAACCTGGAGATCAG

Function

NR:

description
ANTXR1a-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08686460_08701212.mRNA True 1185 mRNA 0.50 13 8686460 8701212

Neighbor

gene id symbol gene type direction distance location
CI01000012_08632596_08634518 METTL18 coding downstream 51942 8632320 ~ 8634518 (-)
CI01000012_08604949_08626648 TDRD9 coding downstream 59812 8604835 ~ 8626648 (-)
CI01000012_08553489_08572819 LRRC9 coding downstream 113641 8553489 ~ 8572819 (-)
CI01000012_08532750_08542754 PCNXL4, PCNX4 coding downstream 140872 8532520 ~ 8545588 (-)
CI01000012_08520569_08525168 PPM1AA, PPM1A coding downstream 161217 8520120 ~ 8525243 (-)
CI01000012_08712109_08714569 GDF10A coding upstream 10501 8711713 ~ 8715987 (-)
CI01000012_08745512_08773403 PTPN20 coding upstream 44015 8745227 ~ 8773403 (-)
CI01000012_08805894_08831322 ARHGAP22 coding upstream 104682 8805894 ~ 8831322 (-)
CI01000012_08841980_08849453 NA coding upstream 140309 8841521 ~ 8849557 (-)
CI01000012_08908244_08917212 VSTM4A coding upstream 206724 8907936 ~ 8917596 (-)
G74778 NA non-coding downstream 14872 8671344 ~ 8671588 (-)
G74728 NA non-coding downstream 29049 8656726 ~ 8657411 (-)
G74767 NA non-coding downstream 74432 8611685 ~ 8612028 (-)
G74750 NA non-coding downstream 133571 8552439 ~ 8552889 (-)
G74748 NA non-coding downstream 136092 8550096 ~ 8550368 (-)
G74837 NA non-coding upstream 39250 8740462 ~ 8740687 (-)
G74841 NA non-coding upstream 49018 8750230 ~ 8750446 (-)
G74842 NA non-coding upstream 55773 8756985 ~ 8757194 (-)
G74867 NA non-coding upstream 138578 8839790 ~ 8840180 (-)
G74816 NA non-coding upstream 149860 8851072 ~ 8853005 (-)
G74701 NA other downstream 318817 8367019 ~ 8367643 (-)
G74648 NA other downstream 420806 8264329 ~ 8265654 (-)
CI01000012_07356934_07358497 NA other downstream 1327915 7356863 ~ 7358612 (-)
G72629 NA other downstream 2538966 6147011 ~ 6147494 (-)
G72294 NA other downstream 3220603 5462840 ~ 5465857 (-)
CI01000012_09068458_09070536 NA other upstream 366694 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 370159 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 381524 9081877 ~ 9083489 (-)
CI01000012_09400481_09401810 EIF4EBP2 other upstream 696864 9398076 ~ 9402378 (-)
G74982 NA other upstream 874436 9575648 ~ 9576149 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006088 antxr1d coding NC_007124.7 CM002897.2 31297016 ~ 31335750 (+)