trnal-uaa_17


Basic Information

Item Value
gene id trnal-uaa_17
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4532715 ~ 4532797 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_17
ACCAGgatggccgagtggttaaggcgttGGACTTAAGATCCAATGGGCAAATGCCCACGTGGGTTCAAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_17 True 83 tRNA 0.54 1 4532715 4532797

Neighbor

gene id symbol gene type direction distance location
LOC111194480 LOC108433077,LOC108280739 coding upstream 55227 4436868 ~ 4477488 (+)
LOC111194482 NA coding upstream 146127 4384859 ~ 4386588 (+)
LOC111194481 LOC108433078 coding upstream 246516 4270017 ~ 4286199 (+)
LOC103021386 NA coding upstream 409305 4121315 ~ 4123410 (+)
LOC103047776 NA coding upstream 534656 3953403 ~ 3998059 (+)
LOC103045023 LOC108433075,LOC108280757 coding downstream 51516 4584313 ~ 4621712 (+)
trnal-uaa_36 NA coding downstream 309672 4842469 ~ 4842550 (+)
trnal-uaa_37 NA coding downstream 309862 4842659 ~ 4842741 (+)
trnal-uaa_38 NA coding downstream 310053 4842850 ~ 4842932 (+)
trnal-uaa_39 NA coding downstream 310243 4843040 ~ 4843122 (+)
G149278 NA non-coding upstream 191248 4284928 ~ 4341467 (+)
G149260 NA non-coding upstream 306320 4171084 ~ 4226395 (+)
G149251 mcm6l,LOC107757789,LOC108280894,LOC108433082,LOC107600254 non-coding upstream 417169 4114171 ~ 4115546 (+)
G149247 NA non-coding upstream 429846 4100946 ~ 4102869 (+)
G149239 NA non-coding upstream 499522 4031287 ~ 4033193 (+)
G149335 NA non-coding downstream 91033 4623830 ~ 4627706 (+)
G149340 NA non-coding downstream 186279 4719076 ~ 4771503 (+)
G149357 NA non-coding downstream 307318 4840115 ~ 4840341 (+)
G149366 LOC108410861 non-coding downstream 374620 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 398016 4930813 ~ 4932837 (+)
trnal-uaa_16 NA other upstream 148 4532485 ~ 4532567 (+)
trnal-uaa_15 NA other upstream 824 4531809 ~ 4531891 (+)
trnal-uaa_14 NA other upstream 1257 4531376 ~ 4531458 (+)
trnal-uaa_13 NA other upstream 2199 4530434 ~ 4530516 (+)
trnal-uaa_12 NA other upstream 2923 4529710 ~ 4529792 (+)
trnal-uaa_18 NA other downstream 1109 4533906 ~ 4533988 (+)
trnal-uaa_19 NA other downstream 1411 4534208 ~ 4534290 (+)
trnal-uaa_20 NA other downstream 1856 4534653 ~ 4534735 (+)
trnal-uaa_21 NA other downstream 2086 4534883 ~ 4534965 (+)
trnal-uaa_22 NA other downstream 2293 4535090 ~ 4535172 (+)

Expression


Co-expression Network