trnal-uaa_33


Basic Information

Item Value
gene id trnal-uaa_33
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4558983 ~ 4559065 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_33
ACCAGggtggccgagtggttaaggcgttGGACTTAAGATCCAATGGGCAAATGCCCACGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_33 True 83 tRNA 0.57 1 4558983 4559065

Neighbor

gene id symbol gene type direction distance location
LOC111194480 LOC108433077,LOC108280739 coding upstream 81495 4436868 ~ 4477488 (+)
LOC111194482 NA coding upstream 172395 4384859 ~ 4386588 (+)
LOC111194481 LOC108433078 coding upstream 272784 4270017 ~ 4286199 (+)
LOC103021386 NA coding upstream 435573 4121315 ~ 4123410 (+)
LOC103047776 NA coding upstream 560924 3953403 ~ 3998059 (+)
LOC103045023 LOC108433075,LOC108280757 coding downstream 25248 4584313 ~ 4621712 (+)
trnal-uaa_36 NA coding downstream 283404 4842469 ~ 4842550 (+)
trnal-uaa_37 NA coding downstream 283594 4842659 ~ 4842741 (+)
trnal-uaa_38 NA coding downstream 283785 4842850 ~ 4842932 (+)
trnal-uaa_39 NA coding downstream 283975 4843040 ~ 4843122 (+)
G149278 NA non-coding upstream 217516 4284928 ~ 4341467 (+)
G149260 NA non-coding upstream 332588 4171084 ~ 4226395 (+)
G149251 mcm6l,LOC107757789,LOC108280894,LOC108433082,LOC107600254 non-coding upstream 443437 4114171 ~ 4115546 (+)
G149247 NA non-coding upstream 456114 4100946 ~ 4102869 (+)
G149239 NA non-coding upstream 525790 4031287 ~ 4033193 (+)
G149335 NA non-coding downstream 64765 4623830 ~ 4627706 (+)
G149340 NA non-coding downstream 160011 4719076 ~ 4771503 (+)
G149357 NA non-coding downstream 281050 4840115 ~ 4840341 (+)
G149366 LOC108410861 non-coding downstream 348352 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 371748 4930813 ~ 4932837 (+)
trnal-uaa_32 NA other upstream 426 4558475 ~ 4558557 (+)
trnal-uaa_31 NA other upstream 755 4558146 ~ 4558228 (+)
trnal-uaa_30 NA other upstream 1279 4557622 ~ 4557704 (+)
trnal-uaa_29 NA other upstream 1608 4557293 ~ 4557375 (+)
trnal-uaa_28 NA other upstream 2130 4556771 ~ 4556853 (+)
trnal-uaa_34 NA other downstream 201 4559266 ~ 4559348 (+)
trnal-uaa_35 NA other downstream 868 4559933 ~ 4560015 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other downstream 125543 4684608 ~ 4764845 (+)
G149595 NA other downstream 531917 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 552259 5111324 ~ 5114716 (+)

Expression


Co-expression Network