trnal-uaa_34


Basic Information

Item Value
gene id trnal-uaa_34
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4559266 ~ 4559348 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_34
ACCAGgatggccgagtggttaaggcgttGGACTTAAGATCCAATGGGCAAATGCCCACGTGGGTTCGATCCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_34 True 83 tRNA 0.55 1 4559266 4559348

Neighbor

gene id symbol gene type direction distance location
LOC111194480 LOC108433077,LOC108280739 coding upstream 81778 4436868 ~ 4477488 (+)
LOC111194482 NA coding upstream 172678 4384859 ~ 4386588 (+)
LOC111194481 LOC108433078 coding upstream 273067 4270017 ~ 4286199 (+)
LOC103021386 NA coding upstream 435856 4121315 ~ 4123410 (+)
LOC103047776 NA coding upstream 561207 3953403 ~ 3998059 (+)
LOC103045023 LOC108433075,LOC108280757 coding downstream 24965 4584313 ~ 4621712 (+)
trnal-uaa_36 NA coding downstream 283121 4842469 ~ 4842550 (+)
trnal-uaa_37 NA coding downstream 283311 4842659 ~ 4842741 (+)
trnal-uaa_38 NA coding downstream 283502 4842850 ~ 4842932 (+)
trnal-uaa_39 NA coding downstream 283692 4843040 ~ 4843122 (+)
G149278 NA non-coding upstream 217799 4284928 ~ 4341467 (+)
G149260 NA non-coding upstream 332871 4171084 ~ 4226395 (+)
G149251 mcm6l,LOC107757789,LOC108280894,LOC108433082,LOC107600254 non-coding upstream 443720 4114171 ~ 4115546 (+)
G149247 NA non-coding upstream 456397 4100946 ~ 4102869 (+)
G149239 NA non-coding upstream 526073 4031287 ~ 4033193 (+)
G149335 NA non-coding downstream 64482 4623830 ~ 4627706 (+)
G149340 NA non-coding downstream 159728 4719076 ~ 4771503 (+)
G149357 NA non-coding downstream 280767 4840115 ~ 4840341 (+)
G149366 LOC108410861 non-coding downstream 348069 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 371465 4930813 ~ 4932837 (+)
trnal-uaa_33 NA other upstream 201 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 709 4558475 ~ 4558557 (+)
trnal-uaa_31 NA other upstream 1038 4558146 ~ 4558228 (+)
trnal-uaa_30 NA other upstream 1562 4557622 ~ 4557704 (+)
trnal-uaa_29 NA other upstream 1891 4557293 ~ 4557375 (+)
trnal-uaa_35 NA other downstream 585 4559933 ~ 4560015 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other downstream 125260 4684608 ~ 4764845 (+)
G149595 NA other downstream 531634 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 551976 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 636793 5196141 ~ 5199985 (+)

Expression


Co-expression Network