CI01000012_08841980_08849453


Basic Information

Item Value
gene id CI01000012_08841980_08849453
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8841521 ~ 8849557 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08841980_08849453.mRNA
CGCTGCTAACAGAACAATTAAAATATCCTTTTATAATGAGTTTCTTACAGTTGGCCGAGAATTTCTTCAGCTTGCAGAAGGCGTAAATATATGGTGGCAGCACAATGTTGCAGGCTTCAGGAAGTTGCATATTTGAATCGATTCAACGAGGTTGGGGAGGTTTCACAGCCCTTCACTTTGCTGCTCTCCATGGAAACCGGCCAGTGGCTGAGCTTCTGCTGAACAGTGGTGCTGATCCAAACATCCCTTGTGATGCAGGACAAACTCCTTTTCACTTCGCTTGCAGTATTGCCATGCAGTACCTGTGGGAGACTGGAATGTTCCGTTTCTCAGATGCGGATAACTATCAGGTCACTCCGCTGCATTTGGCAGCTTCCATGGGCAATACTGATGTAGTCCGGTATCTCCTTAGAGCGAATAGATGCATGCCAGAGGCAGTTGACCACCAGGGGGCGACAGCGCTTCACGTGGCTGCAGAGAAAGGCATGATTGAGGTGTGCTGGCTGCTGTTGAAGAGTGCCGGGCTCCACATTTTACACATGAAAAACCACACTGGCCTCACACCTCTAGACCTCTGTAATCAAGGGAATACTTTTAGACACCAGCAGCTCTCCAGGATTCTGATGCATTTCAGTCAACGGCCAAAAGATCTGATTCCTAAGGACTCATACGTGATGTACTTCTGGGTGCTGTTGCTACCATCTCTCAGTGGGGCAGCGGTTCTCATTATAGCTGCGGCTCTTGGTGAATATGGGGGTATCTTCTCTGCAGTGCTTTTCCCCTGCATGGCAAAAGTCATTCTTTCTCAGTATCACAGACTAAGCAGCTTTCAAAGGTTAGAGGATTGTGATTGGAAAATTGCAAATTGCATTATCACTGATAATATAAGTGATGTTGATGGTGTTATAACCATTTTACTGTTTGATTTGGACTTTCTAAATCAGAACCCGGGACAACTCAAAGAAGCTGACACCGATTCTCGGTTTTCCAGCATAGGAGACTTAATGGAAGCCAGCCAGAGCCCAGACAGATTCTGTATTTACTGTGAGCTAATTAAAGTGGACTATTGCAAACACTGCCGTCTGTGTGACATGTGCATCCAAGACTACGACCACCACTGCCTCTTCCTCAATCAATGTGTGGGACGGGACAATCACCGCATCTTCGTCCTCTTCATCATGTCCATGGTAATGGCTCATGTCATCTTCATCCTCAGTGCCGTTTACTACCTCTACCTGAAACTCTCAGGCTTGCAGCTGTCTGACTGGGGCTCAATGGCGGGAAGAGAGGCCTGGGTCATCCTGCTAGCTCTGCTCAACATCCTCTCTCTGATCTGGGTGGGATGGTTGCTAGTTGAGCAGCTTGATGCCATTTCCTTGGGTACCACCACCTACTTTAGACGGTACGACCACAAGGGGCCTTCTAAAATACAACGTTTGGGAACAGTCCTCTCTTTTCTTCTTGAAGGAAAAAGAAGACAGGAGCACAGTCAGTCTTTTAGCATATAGAGACTTTAGAGACTTTTTGAAATTATAAAGCAACATCACAGTTTAGTCTGTATCTTATTGTTATTTATCAATATACTACACAACTGTCTGGAGGAGTCAAAGCCAGTCTGCAGATTTTGTCCAGCCGCGTAGTGTATGATGGGCACCGATTCCGTTTAATAACATTAAACACAATTTAAAACAAAAGAAAATCATTGTGACTCCCATAGTTTGTAAGAACAAAAGTGAAAAAAAATACATTATATTACCTAGATTATAAATCTTGGTGTTAGTGCTTGAATTAAACAGAGGTCACTGCTGGTTTTCCACTCCCATAATTGTATCTGTACTGTTAATTTTTTTTTATATATATATATGTGAAATATTTTAAATAAACATATTTTAGTGTAAATGTATACATTTTGATTTCTCATTTGTATCATTAATTTTTAAGTAAAAAATAATGGATGGCCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08841980_08849453.mRNA True 1967 mRNA 0.43 8 8841521 8849557

Neighbor

gene id symbol gene type direction distance location
CI01000012_08805894_08831322 ARHGAP22 coding downstream 10199 8805894 ~ 8831322 (-)
CI01000012_08745512_08773403 PTPN20 coding downstream 68118 8745227 ~ 8773403 (-)
CI01000012_08712109_08714569 GDF10A coding downstream 125534 8711713 ~ 8715987 (-)
CI01000012_08686460_08701212 NA coding downstream 140309 8686460 ~ 8701212 (-)
CI01000012_08632596_08634518 METTL18 coding downstream 207003 8632320 ~ 8634518 (-)
CI01000012_08908244_08917212 VSTM4A coding upstream 58379 8907936 ~ 8917596 (-)
CI01000012_08940340_08945093 DRGX coding upstream 90111 8939668 ~ 8945424 (-)
CI01000012_08947834_08963715 ERCC6 coding upstream 98139 8947696 ~ 8963812 (-)
CI01000012_09001061_09005079 CXCL12A, CXCL12B, CXCL12, A-SDF1A, SDF1 coding upstream 151136 8998826 ~ 9005079 (-)
CI01000012_09068458_09070536 NA coding upstream 218813 9067906 ~ 9070765 (-)
G74867 NA non-coding downstream 1341 8839790 ~ 8840180 (-)
G74842 NA non-coding downstream 84327 8756985 ~ 8757194 (-)
G74841 NA non-coding downstream 91075 8750230 ~ 8750446 (-)
G74837 NA non-coding downstream 100834 8740462 ~ 8740687 (-)
G74778 NA non-coding downstream 169933 8671344 ~ 8671588 (-)
G74816 NA non-coding upstream 1515 8851072 ~ 8853005 (-)
G74808 NA non-coding upstream 12820 8862377 ~ 8864523 (-)
G74882 NA non-coding upstream 141481 8991038 ~ 8991246 (-)
G74885 NA non-coding upstream 143664 8993221 ~ 8993420 (-)
G74887 NA non-coding upstream 145053 8994610 ~ 8994899 (-)
G74701 NA other downstream 473878 8367019 ~ 8367643 (-)
G74648 NA other downstream 575867 8264329 ~ 8265654 (-)
CI01000012_07356934_07358497 NA other downstream 1482976 7356863 ~ 7358612 (-)
G72629 NA other downstream 2694027 6147011 ~ 6147494 (-)
G72294 NA other downstream 3375664 5462840 ~ 5465857 (-)
CI01000012_09071892_09073410 NA other upstream 221814 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 233179 9081877 ~ 9083489 (-)
CI01000012_09400481_09401810 EIF4EBP2 other upstream 548519 9398076 ~ 9402378 (-)
G74982 NA other upstream 726091 9575648 ~ 9576149 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location