trnal-uaa_56


Basic Information

Item Value
gene id trnal-uaa_56
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4847275 ~ 4847356 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_56
ACCAGgatggccgagtggttaaggcgttGACTTAAGATCCAATGGATGTAAATCCACGTGGGTTCAAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_56 True 82 tRNA 0.50 1 4847275 4847356

Neighbor

gene id symbol gene type direction distance location
trnal-uaa_55 NA coding upstream 109 4847084 ~ 4847166 (+)
trnal-uaa_54 NA coding upstream 300 4846893 ~ 4846975 (+)
trnal-uaa_53 NA coding upstream 491 4846702 ~ 4846784 (+)
trnal-uaa_52 NA coding upstream 872 4846321 ~ 4846403 (+)
trnal-uaa_51 NA coding upstream 1063 4846130 ~ 4846212 (+)
trnal-uaa_57 NA coding downstream 109 4847465 ~ 4847546 (+)
trnal-uaa_58 NA coding downstream 299 4847655 ~ 4847736 (+)
LOC103027894 LOC108410862,LOC108280684 coding downstream 1797 4849153 ~ 4876388 (+)
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207 coding downstream 126923 4974279 ~ 5051755 (+)
LOC111194608 NA coding downstream 293026 5140382 ~ 5143020 (+)
G149357 NA non-coding upstream 6934 4840115 ~ 4840341 (+)
G149302 NA non-coding upstream 34561 4497244 ~ 4812714 (+)
G149340 NA non-coding upstream 75772 4719076 ~ 4771503 (+)
G149335 NA non-coding upstream 219569 4623830 ~ 4627706 (+)
G149278 NA non-coding upstream 505808 4284928 ~ 4341467 (+)
G149366 LOC108410861 non-coding downstream 60061 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 83457 4930813 ~ 4932837 (+)
G149572 NA non-coding downstream 85608 4932964 ~ 4934234 (+)
G149574 NA non-coding downstream 114734 4962090 ~ 5037794 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 376293 5223649 ~ 5226340 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 82430 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 287260 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 287927 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 288210 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 288718 4558475 ~ 4558557 (+)
G149595 NA other downstream 243626 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 263968 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 348785 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 380562 5227918 ~ 5258861 (+)
G149754 NA other downstream 877913 5725269 ~ 5727420 (+)

Expression


Co-expression Network