trnal-uaa_58


Basic Information

Item Value
gene id trnal-uaa_58
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4847655 ~ 4847736 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_58
ACCAGgatggccgagtggttaaggcgttGACTTAAGATCCAATGGATGTAAATCCACGTGGGTTCAAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_58 True 82 tRNA 0.50 1 4847655 4847736

Neighbor

gene id symbol gene type direction distance location
trnal-uaa_57 NA coding upstream 109 4847465 ~ 4847546 (+)
trnal-uaa_56 NA coding upstream 299 4847275 ~ 4847356 (+)
trnal-uaa_55 NA coding upstream 489 4847084 ~ 4847166 (+)
trnal-uaa_54 NA coding upstream 680 4846893 ~ 4846975 (+)
trnal-uaa_53 NA coding upstream 871 4846702 ~ 4846784 (+)
LOC103027894 LOC108410862,LOC108280684 coding downstream 1417 4849153 ~ 4876388 (+)
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207 coding downstream 126543 4974279 ~ 5051755 (+)
LOC111194608 NA coding downstream 292646 5140382 ~ 5143020 (+)
LOC111194609 NA coding downstream 304829 5152565 ~ 5165963 (+)
LOC111194490 LOC108424092,LOC108280904 coding downstream 323530 5171266 ~ 5172421 (+)
G149357 NA non-coding upstream 7314 4840115 ~ 4840341 (+)
G149302 NA non-coding upstream 34941 4497244 ~ 4812714 (+)
G149340 NA non-coding upstream 76152 4719076 ~ 4771503 (+)
G149335 NA non-coding upstream 219949 4623830 ~ 4627706 (+)
G149278 NA non-coding upstream 506188 4284928 ~ 4341467 (+)
G149366 LOC108410861 non-coding downstream 59681 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 83077 4930813 ~ 4932837 (+)
G149572 NA non-coding downstream 85228 4932964 ~ 4934234 (+)
G149574 NA non-coding downstream 114354 4962090 ~ 5037794 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 375913 5223649 ~ 5226340 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 82810 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 287640 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 288307 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 288590 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 289098 4558475 ~ 4558557 (+)
G149595 NA other downstream 243246 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 263588 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 348405 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 380182 5227918 ~ 5258861 (+)
G149754 NA other downstream 877533 5725269 ~ 5727420 (+)

Expression


Co-expression Network