G155250


Basic Information

Item Value
gene id G155250
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 395765 ~ 399614 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU210467
CCTCCAGCTCAGTCAGTCTCTGGGTCAGTGATTGGTCAGCAGGTGGTTCTTCAGGTGAGCCTCCAGGTGCTGCAGGCTGAGTGGAGGATTTACTCATGACCTCCAGCTGAGCCCGCAGGACCTGCTCCTTCTCCGACATCTCGCTCTCGTGTTTCTCCACCGCCCTCCTCAGCTCCGCCTGGTGTTTCTCCATCAGGTCTCGAACCTGAGTGCGCATGATGTGCCTCTCCGCCTCCATCTTAGAGTGCAGGTTCTCCTTCTCGCTCTGCAGGAGCCGCATTCGCTCCGCCAGCTC
>TU210468
CCTCCAGCTCAGTCAGTCTCTGGGTCAGTGATTGGTCAGCAGGTGGTTCTTCAGGTGAGCCTCCAGGTGCTGCAGGCTGAGTGGAGGATTTACTCATGACCTCCAGCTGAGCCCGCAGGACCTGCTCCTTCTCCGACATCTCGCTCTCGTGTTTCTCCACCGCCCTCCTCAGCTCCGCCTGGTGTTTCTCCATCAGGTCTCGAACCTGAGTGCGCATGATGTGCCTCTCCGCCTCCATCTTAGAGTGCAGGTTCTCCTTCTCGCTCTGCAGGAGCCGCATTCGCTCCGCCAGCTC
>TU210470
CCTCCAGCTCAGTCAGTCTCTGGGTCAGTGATTGGTCAGCAGGTGGTTCTTCAGGTGAGCCTCCAGGTGCTGCAGGCTGAGTGGAGGATTTACTCATGACCTCCAGCTGAGCCCGCAGGACCTGCTCCTTCTCCGACATCTCGCTCTCGTGTTTCTCCACCGCCCTCCTCAGCTCCGCCTGGTGTTTCTCCATCAGGTCTCGAACCTGAGTGCGCATGATGTGCCTCTCCGCCTCCATCTTAGAGTGCAGGTTCTCCTTCTCGCTCTGCAGGAGCCGCATTCGCTCCGCCAGCTC
>TU210471
CCTCCAGCTCAGTCAGTCTCTGGGTCAGTGATTGGTCAGCAGGTGGTTCTTCAGGTGAGCCTCCAGGTGCTGCAGGCTGAGTGGAGGATTTACTCATGACCTCCAGCTGAGCCCGCAGGACCTGCTCCTTCTCCGACATCTCGCTCTCGTGTTTCTCCACCGCCCTCCTCAGCTCCGCCTGGTGTTTCTCCATCAGGTCTCGAACCTGAGTGCGCATGATGTGCCTCTCCGCCTCCATCTTAGAGTGCAGGTTCTCCTTCTCGCTCTGCAGGAGCCGCATTCGCTCCGCCAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210467 False 295 lncRNA 0.60 2 398076 399614
TU210468 False 295 lncRNA 0.60 2 398076 399614
TU210470 True 295 lncRNA 0.60 2 395765 399614
TU210471 False 295 lncRNA 0.60 3 395765 399614

Neighbor

gene id symbol gene type direction distance location
LOC103033531 NA coding downstream 21914 421528 ~ 537878 (+)
LOC103040340 LOC108410554,LOC107566291 coding downstream 152315 551929 ~ 563776 (+)
LOC103034482 NA coding downstream 279381 678995 ~ 681903 (+)
blvrb blvrb,LOC107692505 coding downstream 304741 704355 ~ 713021 (+)
sertad3 NA coding downstream 314295 713909 ~ 718705 (+)
G155233 NA non-coding upstream 35068 344963 ~ 360697 (+)
G155234 NA non-coding upstream 64491 330837 ~ 331274 (+)
G155229 NA non-coding upstream 66601 327423 ~ 329164 (+)
G155230 NA non-coding upstream 106800 288741 ~ 288965 (+)
G155217 NA non-coding upstream 183711 211852 ~ 212054 (+)
G155290 NA non-coding downstream 93797 493411 ~ 497140 (+)
G155283 NA non-coding downstream 188228 587842 ~ 590204 (+)
G155300 NA non-coding downstream 192060 591674 ~ 593996 (+)
G155328 NA non-coding downstream 295912 695526 ~ 703112 (+)
G155332 LOC108443044 non-coding downstream 320681 720295 ~ 724186 (+)
G155206 NA other upstream 242502 149347 ~ 153263 (+)
LOC103044527 NA other downstream 703836 1103450 ~ 1106792 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other downstream 787532 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other downstream 804127 1203741 ~ 1223350 (+)
G155776 NA other downstream 2338747 2738361 ~ 2755112 (+)
LOC111194753 NA other downstream 3211404 3611018 ~ 3614491 (+)

Expression


Co-expression Network