XLOC_000758


Basic Information

Item Value
gene id XLOC_000758
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55678912 ~ 55679447 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003234
GGCAGTCTGTCAATTCCACAACACCTTCTACGACAGGTGAGGATAATGCTGGACTGCACTgtgatattaaaaacaaaactcaatGATCTATTTCTTTATTTGAAACATGACACATCAGCATCAGAATCTGatctaatatgtttttttttctgttattattttagtttctttAAAGCCAGTCACTTCCGCAACATCTACTAGTTCTGCTAATTTTACTGGTAAGAGTGGCTAGATATggtcttttaaaaatattgttggtTTTTGTAAAGAAGTACACAGCTGATCATCTGACTTTGATGTAACATCTTTTGTATCTGTTTTTGCATCAGTGCCTTCACAGCCTGTCAATTCCACAACATCTGCTAATTTCACTTCCACAGGTGAGGATAATGCTGCACTGGACTGTAAAGCCTAGTTTGTACTCGACTCGTACGGTAATTCGCTTGAGTGCACGTGGTGAATGTGACATCATCACGGTGTTTGTGTTGGTTCGCTTTGGGTGTGTGAAACGAAATTTCGGCTTTTGGAgcacatgt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003234 True 536 lncRNA 0.39 1 55678912 55679447

Neighbor

gene id symbol gene type direction distance location
XLOC_000757 adgre8 coding upstream 10522 55662491 ~ 55668390 (+)
XLOC_000756 adgre7 coding upstream 32499 55643198 ~ 55646413 (+)
XLOC_000755 adgre18 coding upstream 61757 55608520 ~ 55617155 (+)
XLOC_000754 umod coding upstream 72339 55600504 ~ 55606573 (+)
XLOC_000753 adgre19 coding upstream 91246 55583116 ~ 55587666 (+)
XLOC_000759 adgre6 coding downstream 23673 55703120 ~ 55707336 (+)
XLOC_000760 NA coding downstream 35471 55714918 ~ 55729126 (+)
XLOC_000761 NA coding downstream 38131 55717578 ~ 55721415 (+)
XLOC_000762 adgre17 coding downstream 44423 55723870 ~ 55728458 (+)
XLOC_000763 adgre10 coding downstream 50758 55730205 ~ 55747003 (+)
XLOC_000741 NA non-coding upstream 99476 55314474 ~ 55579436 (+)
XLOC_000745 NA non-coding upstream 201777 55370138 ~ 55477135 (+)
XLOC_000748 NA non-coding upstream 239637 55437572 ~ 55439275 (+)
XLOC_000747 NA non-coding upstream 285880 55392380 ~ 55393032 (+)
XLOC_000746 NA non-coding upstream 293461 55385192 ~ 55385451 (+)
XLOC_000768 NA non-coding downstream 737191 56416638 ~ 56556305 (+)
XLOC_000772 NA non-coding downstream 881779 56561226 ~ 56604352 (+)
XLOC_000773 NA non-coding downstream 883380 56562827 ~ 56564352 (+)

Expression


Co-expression Network