G155762


Basic Information

Item Value
gene id G155762
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 2699031 ~ 2719738 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211244
aatattaaacaaTCCAAGGCCAATGACGtaaccagccccgcccccaccaaCACGCTGTCTCACGTCCAGGCAGattaagagctgagtcagcgacAAGCACTAAAAAAccagagaaaaacaacaaaacaaatcaggcatttaaatgacttttaaacAGGTAAATAAGAGAGTtcttttctgggattaaaagcgtgaattcagctgtaactggaaatatctgcgcaaaagtgtgctggactgaggtgcacagctttcgacacgtgAGTTTACATTACAAgaacgtgcccaaccatgtggatggagtcCATgtggttaccttgtgtttacttcTGCTCCCCTTTGCGCTTCTTGAACAGGCAGCAACAGCCTGtcattcacacagacacagagacagcgctgtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211244 True 403 lncRNA 0.45 2 2699031 2719738

Neighbor

gene id symbol gene type direction distance location
tspan4 tspan4,tspan4a,LOC106561924 coding upstream 793317 1692598 ~ 1905714 (+)
LOC103036983 NA coding upstream 1025837 1662978 ~ 1673194 (+)
LOC103036673 NA coding upstream 1040069 1652654 ~ 1658962 (+)
trip12 trip12,LOC107679016,LOC107710892 coding upstream 1076859 1567115 ~ 1622172 (+)
LOC103025301 LOC108414026,LOC105012578,LOC107684602,LOC107711073,LOC107566685,LOC107714437,LOC107679025,LOC100332250 coding upstream 1241505 1415407 ~ 1457526 (+)
parp9 NA coding downstream 72301 2792039 ~ 2806754 (+)
LOC103044837 NA coding downstream 163089 2882827 ~ 2938070 (+)
ndufa10 NA coding downstream 223036 2942774 ~ 2963551 (+)
LOC103025504 LOC108425960,LOC108266765 coding downstream 1138768 3858506 ~ 3899215 (+)
LOC103036562 hipk3 coding downstream 1258014 3977752 ~ 3999462 (+)
G155757 NA non-coding upstream 64423 2634162 ~ 2634608 (+)
G155750 NA non-coding upstream 123649 2575080 ~ 2575382 (+)
G155722 ddb1,LOC102208280,LOC106561926 non-coding upstream 751864 1926434 ~ 1947167 (+)
G155718 NA non-coding upstream 922157 1774441 ~ 1776874 (+)
G155717 NA non-coding upstream 933324 1763407 ~ 1765707 (+)
G155765 NA non-coding downstream 14724 2734462 ~ 2734664 (+)
G155785 NA non-coding downstream 50352 2770090 ~ 2770853 (+)
G155792 NA non-coding downstream 59849 2779587 ~ 2779883 (+)
G155793 NA non-coding downstream 60390 2780128 ~ 2780371 (+)
G155809 NA non-coding downstream 107858 2827596 ~ 2828274 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 1420769 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 1475681 1203741 ~ 1223350 (+)
LOC103044527 NA other upstream 1592239 1103450 ~ 1106792 (+)
G155206 NA other upstream 2545768 149347 ~ 153263 (+)
G155776 NA other downstream 18623 2738361 ~ 2755112 (+)
LOC111194753 NA other downstream 891280 3611018 ~ 3614491 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other downstream 1209593 3929331 ~ 3932163 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 1855930 4575668 ~ 4637290 (+)
G156188 NA other downstream 2437416 5157154 ~ 5157400 (+)

Expression


Co-expression Network