G155785


Basic Information

Item Value
gene id G155785
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 2770090 ~ 2770853 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211271
CCAGTGAGAAGATATATCTGTAGTCTGAGCTCATACAACATTGGGTACACAGTAAATTCAGACctaaataaaccatttttaaaatggcATCTAATGGCATAATGGCTTtaatccagagcgacttacaatcACAGAGGTGGGTCAATGAaaagttaggagtcttgcccaaggactcttattgctGTAATGCCCACAGtaacccagaccaggaattgaaccccaatctcccacatgatgtgctAACCCACTgacaggtagtggtgttatccactgtgccacaccaaaCCATATCAGTGTTTGTGATGAGAGACTGTCCTCTGAAAGTTTAACTTGATTGTGAAGCTCAAAAGTATACATATAGTCATTGATACAAGCCGTCAAGtatcaatgtttttattgaaatatatgGAAACTCTAAACTACCCAAGACCCACCCCCATTTTTGAATTACTGAAGTCGTTGCTTCATTGCTTCACATAGTGATGCTAATCAAATGATTAGGGTAAACCTGAGGGGAAGAACACTGGTTGGGatattctgtgaaactgacacccaAAAATACATGTCATATGGGTATTTCCTTAGCTTAGCCACCCAGGTAACAAGTTAGCACACTTTACCACAATGTAAACCCCACAGTTTGTTCGAACCTAAATAAATGAACTCTGTTTTATTACTCAACTAGTTTAAATTCGGTGAATGTTTGTCTACACATGGACATTTTAAATGGGAACTTTGAGTTGAAACAGTTTAACTGATtctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211271 True 764 lncRNA 0.39 1 2770090 2770853

Neighbor

gene id symbol gene type direction distance location
lrch3 lrch3,LOC103027580 coding upstream 49131 2671503 ~ 2720959 (+)
tspan4 tspan4,tspan4a,LOC106561924 coding upstream 864376 1692598 ~ 1905714 (+)
LOC103036983 NA coding upstream 1096896 1662978 ~ 1673194 (+)
LOC103036673 NA coding upstream 1111128 1652654 ~ 1658962 (+)
trip12 trip12,LOC107679016,LOC107710892 coding upstream 1147918 1567115 ~ 1622172 (+)
parp9 NA coding downstream 21186 2792039 ~ 2806754 (+)
LOC103044837 NA coding downstream 111974 2882827 ~ 2938070 (+)
ndufa10 NA coding downstream 171921 2942774 ~ 2963551 (+)
LOC103025504 LOC108425960,LOC108266765 coding downstream 1087653 3858506 ~ 3899215 (+)
LOC103036562 hipk3 coding downstream 1206899 3977752 ~ 3999462 (+)
G155765 NA non-coding upstream 35426 2734462 ~ 2734664 (+)
G155762 NA non-coding upstream 50352 2699031 ~ 2719738 (+)
G155757 NA non-coding upstream 135482 2634162 ~ 2634608 (+)
G155750 NA non-coding upstream 194708 2575080 ~ 2575382 (+)
G155722 ddb1,LOC102208280,LOC106561926 non-coding upstream 822923 1926434 ~ 1947167 (+)
G155792 NA non-coding downstream 8734 2779587 ~ 2779883 (+)
G155793 NA non-coding downstream 9275 2780128 ~ 2780371 (+)
G155809 NA non-coding downstream 56743 2827596 ~ 2828274 (+)
G155854 NA non-coding downstream 220106 2990959 ~ 2991367 (+)
G155856 NA non-coding downstream 244851 3015704 ~ 3035326 (+)
G155776 NA other upstream 14978 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 1491828 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 1546740 1203741 ~ 1223350 (+)
LOC103044527 NA other upstream 1663298 1103450 ~ 1106792 (+)
G155206 NA other upstream 2616827 149347 ~ 153263 (+)
LOC111194753 NA other downstream 840165 3611018 ~ 3614491 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other downstream 1158478 3929331 ~ 3932163 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 1804815 4575668 ~ 4637290 (+)
G156188 NA other downstream 2386301 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 4322654 7093507 ~ 7171625 (+)

Expression


Co-expression Network