G155792


Basic Information

Item Value
gene id G155792
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 2779587 ~ 2779883 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211278
ttctgccatgtcctccatctctaaaaacaacagaaaaacagctaaacatgagatttaaaaggcatttacatGTTCACATGTTGTTTAAGCGAAGAGAGTACTGATATCTAGTGAATaattatgtaatctgttgtgtttgggcacttttggagacacagaccaagtttttttctgtccccagcactttgtgtaatgctgcactgttacaaattaacgattagtcgacaatgaaatttgtagtcaacaaatttaaataatcgtcattgtcgattatatcgactaatcgttgcagtcCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211278 True 297 lncRNA 0.35 1 2779587 2779883

Neighbor

gene id symbol gene type direction distance location
lrch3 lrch3,LOC103027580 coding upstream 58628 2671503 ~ 2720959 (+)
tspan4 tspan4,tspan4a,LOC106561924 coding upstream 873873 1692598 ~ 1905714 (+)
LOC103036983 NA coding upstream 1106393 1662978 ~ 1673194 (+)
LOC103036673 NA coding upstream 1120625 1652654 ~ 1658962 (+)
trip12 trip12,LOC107679016,LOC107710892 coding upstream 1157415 1567115 ~ 1622172 (+)
parp9 NA coding downstream 12156 2792039 ~ 2806754 (+)
LOC103044837 NA coding downstream 102944 2882827 ~ 2938070 (+)
ndufa10 NA coding downstream 162891 2942774 ~ 2963551 (+)
LOC103025504 LOC108425960,LOC108266765 coding downstream 1078623 3858506 ~ 3899215 (+)
LOC103036562 hipk3 coding downstream 1197869 3977752 ~ 3999462 (+)
G155785 NA non-coding upstream 8734 2770090 ~ 2770853 (+)
G155765 NA non-coding upstream 44923 2734462 ~ 2734664 (+)
G155762 NA non-coding upstream 59849 2699031 ~ 2719738 (+)
G155757 NA non-coding upstream 144979 2634162 ~ 2634608 (+)
G155750 NA non-coding upstream 204205 2575080 ~ 2575382 (+)
G155793 NA non-coding downstream 245 2780128 ~ 2780371 (+)
G155809 NA non-coding downstream 47713 2827596 ~ 2828274 (+)
G155854 NA non-coding downstream 211076 2990959 ~ 2991367 (+)
G155856 NA non-coding downstream 235821 3015704 ~ 3035326 (+)
LOC111194715 NA non-coding downstream 249692 3029575 ~ 3030986 (+)
G155776 NA other upstream 24475 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 1501325 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 1556237 1203741 ~ 1223350 (+)
LOC103044527 NA other upstream 1672795 1103450 ~ 1106792 (+)
G155206 NA other upstream 2626324 149347 ~ 153263 (+)
LOC111194753 NA other downstream 831135 3611018 ~ 3614491 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other downstream 1149448 3929331 ~ 3932163 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 1795785 4575668 ~ 4637290 (+)
G156188 NA other downstream 2377271 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 4313624 7093507 ~ 7171625 (+)

Expression


Co-expression Network