G155976


Basic Information

Item Value
gene id G155976
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 3846849 ~ 3847617 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211503
actttctctgtttgcggacctcgggggcgttactcacggctttaaaagacagtctggtggcgcgGATTTCCTATATCGCCCGCAGCTGTGCGCAATCTAGAATCCTATTTCGTCACTCACACTCGCCGAGGCGTCAGCTGTTGTGTGAAGACCCTCTCGTGTGAAGACcaacgcgggtaaagacctgcgagtctacctgcgcgagtcCACCGAGCAAGGACACTGACAAGGCAGCCCGTCCTACTGCCTCCTAAAATGTGCTCCCAACACATCTCAGTTATCTCCGGCACGCACAGAAGgcgtaaaaacacaaacaggcgCCAGGATCATACTAACCTGCGTCCACTAAAACAAACCACGCCCACTactacctcattctctgttgGGCTATGGAACTGCCAGTCGGCTGTTAATAAAGCAGACTTTATCGCCTCTTATGCGAATCATCAGTCATTACAACTGCTGGCACTGACTGAAACTTGGATCAAACCTGAAAATACTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211503 True 504 lncRNA 0.51 2 3846849 3847617

Neighbor

gene id symbol gene type direction distance location
ndufa10 NA coding upstream 883298 2942774 ~ 2963551 (+)
LOC103044837 NA coding upstream 908779 2882827 ~ 2938070 (+)
parp9 NA coding upstream 1040095 2792039 ~ 2806754 (+)
lrch3 lrch3,LOC103027580 coding upstream 1125890 2671503 ~ 2720959 (+)
tspan4 tspan4,tspan4a,LOC106561924 coding upstream 1941135 1692598 ~ 1905714 (+)
LOC103025504 LOC108425960,LOC108266765 coding downstream 10889 3858506 ~ 3899215 (+)
LOC103036562 hipk3 coding downstream 130135 3977752 ~ 3999462 (+)
LOC103036857 LOC108433503,LOC108264854 coding downstream 160709 4008326 ~ 4123480 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding downstream 448702 4296319 ~ 4510540 (+)
LOC103037478 LOC108434021 coding downstream 830586 4678203 ~ 4738405 (+)
G155967 NA non-coding upstream 77522 3768573 ~ 3769327 (+)
G155956 NA non-coding upstream 169992 3676632 ~ 3676857 (+)
G155866 NA non-coding upstream 725689 3120035 ~ 3121160 (+)
G155856 NA non-coding upstream 811523 3015704 ~ 3035326 (+)
LOC111194715 NA non-coding upstream 815863 3029575 ~ 3030986 (+)
G155978 NA non-coding downstream 838 3848455 ~ 3848872 (+)
G155985 NA non-coding downstream 59377 3906994 ~ 3907195 (+)
G156009 NA non-coding downstream 113277 3960894 ~ 4005992 (+)
G156050 NA non-coding downstream 340889 4188506 ~ 4188789 (+)
G156060 NA non-coding downstream 397634 4245251 ~ 4245521 (+)
LOC111194753 NA other upstream 232358 3611018 ~ 3614491 (+)
G155776 NA other upstream 1091737 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 2568587 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 2623499 1203741 ~ 1223350 (+)
LOC103044527 NA other upstream 2740057 1103450 ~ 1106792 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other downstream 81714 3929331 ~ 3932163 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 728051 4575668 ~ 4637290 (+)
G156188 NA other downstream 1309537 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 3245890 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 3524759 7372376 ~ 7431568 (+)

Expression


Co-expression Network