G156096


Basic Information

Item Value
gene id G156096
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 4484390 ~ 4484641 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211646
taaagcagcagcaggtcagaaagaaactcaataatatatccaaaataaaacaataaaataagtgaatctatgaacccaaaagtctgtgtaaagttccttacagcactttctcataagtttctcactttaactcatgaagtctctcagtacatcctgagagcatctctacaggacagtgtgtgaatgtgtgttcatttatagactgtagctccagtaggtgtgctgggttagtgctggagataaaactagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211646 True 252 lncRNA 0.37 1 4484390 4484641

Neighbor

gene id symbol gene type direction distance location
LOC103036857 LOC108433503,LOC108264854 coding upstream 360910 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 484928 3977752 ~ 3999462 (+)
LOC103025504 LOC108425960,LOC108266765 coding upstream 585175 3858506 ~ 3899215 (+)
ndufa10 NA coding upstream 1520839 2942774 ~ 2963551 (+)
LOC103044837 NA coding upstream 1546320 2882827 ~ 2938070 (+)
LOC103037478 LOC108434021 coding downstream 193562 4678203 ~ 4738405 (+)
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding downstream 431587 4916228 ~ 4920871 (+)
LOC103036856 LOC103036856 coding downstream 1037045 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 1052093 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 1128320 5612961 ~ 5619291 (+)
G156080 NA non-coding upstream 114285 4369730 ~ 4370105 (+)
G156066 NA non-coding upstream 214682 4269505 ~ 4269708 (+)
G156062 NA non-coding upstream 236351 4247822 ~ 4248039 (+)
G156060 NA non-coding upstream 238869 4245251 ~ 4245521 (+)
G156050 NA non-coding upstream 295601 4188506 ~ 4188789 (+)
G156095 NA non-coding downstream 28179 4512820 ~ 4513705 (+)
G156107 NA non-coding downstream 65599 4550240 ~ 4550867 (+)
G156121 NA non-coding downstream 162987 4647628 ~ 4648023 (+)
G156151 NA non-coding downstream 383449 4868090 ~ 4868355 (+)
G156153 NA non-coding downstream 403955 4888596 ~ 4889001 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 552227 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 869899 3611018 ~ 3614491 (+)
G155776 NA other upstream 1729278 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 3206128 1187146 ~ 1278262 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 91027 4575668 ~ 4637290 (+)
G156188 NA other downstream 672513 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 2608866 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2887735 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 3115926 7600567 ~ 7606668 (+)

Expression


Co-expression Network