G156121


Basic Information

Item Value
gene id G156121
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 4647628 ~ 4648023 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211673
cgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacattcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccctccactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcttaacacctctaacacactaactacttctaacctcatttccttcttcccctccttcactcctctatcctattattcccctttgacctccttttatccctatccaaagatgtttttcctttaaacttattttacattgtacttgactattgtaagtcgctttggacaaaagcgtctgccaaatgtaatgtaatgtaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211673 True 396 lncRNA 0.43 1 4647628 4648023

Neighbor

gene id symbol gene type direction distance location
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 137088 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 524148 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 648166 3977752 ~ 3999462 (+)
LOC103025504 LOC108425960,LOC108266765 coding upstream 748413 3858506 ~ 3899215 (+)
ndufa10 NA coding upstream 1684077 2942774 ~ 2963551 (+)
LOC103037478 LOC108434021 coding downstream 30180 4678203 ~ 4738405 (+)
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding downstream 268205 4916228 ~ 4920871 (+)
LOC103036856 LOC103036856 coding downstream 873663 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 888711 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 964938 5612961 ~ 5619291 (+)
G156107 NA non-coding upstream 96761 4550240 ~ 4550867 (+)
G156095 NA non-coding upstream 133923 4512820 ~ 4513705 (+)
G156096 NA non-coding upstream 162987 4484390 ~ 4484641 (+)
G156080 NA non-coding upstream 277523 4369730 ~ 4370105 (+)
G156066 NA non-coding upstream 377920 4269505 ~ 4269708 (+)
G156151 NA non-coding downstream 220067 4868090 ~ 4868355 (+)
G156153 NA non-coding downstream 240573 4888596 ~ 4889001 (+)
G156157 NA non-coding downstream 305051 4953074 ~ 4953274 (+)
G156165 NA non-coding downstream 363803 5011826 ~ 5012075 (+)
G156184 NA non-coding downstream 472981 5121004 ~ 5121206 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 10338 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 715465 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1033137 3611018 ~ 3614491 (+)
G155776 NA other upstream 1892516 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 3369366 1187146 ~ 1278262 (+)
G156188 NA other downstream 509131 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 2445484 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2724353 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2952544 7600567 ~ 7606668 (+)
G157055 NA other downstream 3921907 8569930 ~ 8570877 (+)

Expression


Co-expression Network