G156165


Basic Information

Item Value
gene id G156165
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 5011826 ~ 5012075 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211726
atcgtcgctgtcctatgaaaaacacttatctccatttttgtcgatttttagtttagtacataatttgaacagacaaactgtcccttacactgtgtcaaaatttcttgatgaacggaccaatagaaactcttcaaaattacctgaaataaactctttttacattgacttcaattgaaagtttacaaggttttttccctctcctgtaaagttgctgttttggagataagtgtttttcattggacagcgacga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211726 True 250 lncRNA 0.34 1 5011826 5012075

Neighbor

gene id symbol gene type direction distance location
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding upstream 90955 4916228 ~ 4920871 (+)
LOC103037478 LOC108434021 coding upstream 273421 4678203 ~ 4738405 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 501286 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 888346 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 1012364 3977752 ~ 3999462 (+)
LOC103036856 LOC103036856 coding downstream 509611 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 524659 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 600886 5612961 ~ 5619291 (+)
atmin atmin coding downstream 609145 5621220 ~ 5630190 (+)
LOC103034771 LOC108442590 coding downstream 627173 5639248 ~ 5641113 (+)
G156157 NA non-coding upstream 58552 4953074 ~ 4953274 (+)
G156153 NA non-coding upstream 122825 4888596 ~ 4889001 (+)
G156151 NA non-coding upstream 143471 4868090 ~ 4868355 (+)
G156121 NA non-coding upstream 363803 4647628 ~ 4648023 (+)
G156107 NA non-coding upstream 460959 4550240 ~ 4550867 (+)
G156184 NA non-coding downstream 108929 5121004 ~ 5121206 (+)
G156189 NA non-coding downstream 170459 5182534 ~ 5183300 (+)
G156190 NA non-coding downstream 198880 5210955 ~ 5211434 (+)
G156202 NA non-coding downstream 314687 5326762 ~ 5326971 (+)
G156204 NA non-coding downstream 429663 5441738 ~ 5441999 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 374536 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 1079663 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1397335 3611018 ~ 3614491 (+)
G155776 NA other upstream 2256714 2738361 ~ 2755112 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 3788476 1203741 ~ 1223350 (+)
G156188 NA other downstream 145079 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 2081432 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2360301 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2588492 7600567 ~ 7606668 (+)
G157055 NA other downstream 3557855 8569930 ~ 8570877 (+)

Expression


Co-expression Network