G156188


Basic Information

Item Value
gene id G156188
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 5157154 ~ 5157400 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211750
ccctgatgccctaaacaacttttatgcacggtttgaggcacaaaacaacacgatggcgagaaagaccatgcccaagccggacgagcaggtgttgtgcctgactgcagtggatgtgaggaacactctgcgcagagtcaacccacgaaaagctgcaggaccacacaacatccccggcagagtgctcagggagtgcgcagaccagctgacagatgttctcacggacatcttcaacatctccctgtgcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211750 True 247 TUCP 0.55 1 5157154 5157400

Neighbor

gene id symbol gene type direction distance location
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding upstream 236283 4916228 ~ 4920871 (+)
LOC103037478 LOC108434021 coding upstream 418749 4678203 ~ 4738405 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 646614 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 1033674 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 1157692 3977752 ~ 3999462 (+)
LOC103036856 LOC103036856 coding downstream 364286 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 379334 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 455561 5612961 ~ 5619291 (+)
atmin atmin coding downstream 463820 5621220 ~ 5630190 (+)
LOC103034771 LOC108442590 coding downstream 481848 5639248 ~ 5641113 (+)
G156184 NA non-coding upstream 35948 5121004 ~ 5121206 (+)
G156165 NA non-coding upstream 145079 5011826 ~ 5012075 (+)
G156157 NA non-coding upstream 203880 4953074 ~ 4953274 (+)
G156153 NA non-coding upstream 268153 4888596 ~ 4889001 (+)
G156151 NA non-coding upstream 288799 4868090 ~ 4868355 (+)
G156189 NA non-coding downstream 25134 5182534 ~ 5183300 (+)
G156190 NA non-coding downstream 53555 5210955 ~ 5211434 (+)
G156202 NA non-coding downstream 169362 5326762 ~ 5326971 (+)
G156204 NA non-coding downstream 284338 5441738 ~ 5441999 (+)
G156209 NA non-coding downstream 327364 5484764 ~ 5485045 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 519864 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 1224991 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1542663 3611018 ~ 3614491 (+)
G155776 NA other upstream 2402042 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 3878892 1187146 ~ 1278262 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 1936107 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2214976 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2443167 7600567 ~ 7606668 (+)
G157055 NA other downstream 3412530 8569930 ~ 8570877 (+)
G157383 NA other downstream 4783429 9940829 ~ 9941805 (+)

Expression


Co-expression Network