G156190


Basic Information

Item Value
gene id G156190
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 5210955 ~ 5211434 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211752
ggtagacgttctaaggggtcccgccagccgaagGAGGatcccttttccggggaggatttgctTGGGGGGGCGCTGCGGGTGTGTGCGGGGAGCCTCGGGACTCGTCTCAGTTTGGGTGAAACCTACGAGTACCCGAGGCTCGTGGAGCGGAAGCCGTGGGACTTCCTCGgttgcgctcccagcagctccgaggaggaagaggagctctaccccgcaccagcccgtactccattgccgtttcccccaggggctGTACTCTACCCGCGCTCGGTGACTTTCCCGGCCGAGATGCcacgctccgagaatcccgcggccgagacgccgcactccgagaatcccgcgaccGAGACACCACGCTCCgagaagcacgcggctgaggctccacgccccgtgactcccgtggctcagccgctccccgagacttcagcggcggccgcgccgcgctcacagactgcagcggcggcagcgccgctctccgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211752 True 480 lncRNA 0.68 1 5210955 5211434

Neighbor

gene id symbol gene type direction distance location
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding upstream 290084 4916228 ~ 4920871 (+)
LOC103037478 LOC108434021 coding upstream 472550 4678203 ~ 4738405 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 700415 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 1087475 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 1211493 3977752 ~ 3999462 (+)
LOC103036856 LOC103036856 coding downstream 310252 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 325300 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 401527 5612961 ~ 5619291 (+)
atmin atmin coding downstream 409786 5621220 ~ 5630190 (+)
LOC103034771 LOC108442590 coding downstream 427814 5639248 ~ 5641113 (+)
G156189 NA non-coding upstream 27655 5182534 ~ 5183300 (+)
G156184 NA non-coding upstream 89749 5121004 ~ 5121206 (+)
G156165 NA non-coding upstream 198880 5011826 ~ 5012075 (+)
G156157 NA non-coding upstream 257681 4953074 ~ 4953274 (+)
G156153 NA non-coding upstream 321954 4888596 ~ 4889001 (+)
G156202 NA non-coding downstream 115328 5326762 ~ 5326971 (+)
G156204 NA non-coding downstream 230304 5441738 ~ 5441999 (+)
G156209 NA non-coding downstream 273330 5484764 ~ 5485045 (+)
G156215 NA non-coding downstream 389671 5601105 ~ 5601659 (+)
G156225 NA non-coding downstream 390898 5602332 ~ 5611273 (+)
G156188 NA other upstream 53555 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 573665 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 1278792 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1596464 3611018 ~ 3614491 (+)
G155776 NA other upstream 2455843 2738361 ~ 2755112 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 1882073 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2160942 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2389133 7600567 ~ 7606668 (+)
G157055 NA other downstream 3358496 8569930 ~ 8570877 (+)
G157383 NA other downstream 4729395 9940829 ~ 9941805 (+)

Expression


Co-expression Network