G156202


Basic Information

Item Value
gene id G156202
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 5326762 ~ 5326971 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211774
TCCAGCGGGAGGAAATGGTGCGGTCGGCGTCCAGGGCGGGGCGGGGCGGGGCGGGGCGTGCATGTTCTCTCTCAGGTCCGCACTGCAAACCCAGCAGCGCTGGGTTGTTTAAAATTACCCAACAAACGAAAAAATAACCCGTATTTTTGACCCAACCTCAGTAACGTAGCAGTTGGGTAGTTTAAATAACCCAGCATTTTTTAgggtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211774 True 210 lncRNA 0.53 1 5326762 5326971

Neighbor

gene id symbol gene type direction distance location
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding upstream 405891 4916228 ~ 4920871 (+)
LOC103037478 LOC108434021 coding upstream 588357 4678203 ~ 4738405 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 816222 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 1203282 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 1327300 3977752 ~ 3999462 (+)
LOC103036856 LOC103036856 coding downstream 194715 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 209763 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 285990 5612961 ~ 5619291 (+)
atmin atmin coding downstream 294249 5621220 ~ 5630190 (+)
LOC103034771 LOC108442590 coding downstream 312277 5639248 ~ 5641113 (+)
G156190 NA non-coding upstream 115328 5210955 ~ 5211434 (+)
G156189 NA non-coding upstream 143462 5182534 ~ 5183300 (+)
G156184 NA non-coding upstream 205556 5121004 ~ 5121206 (+)
G156165 NA non-coding upstream 314687 5011826 ~ 5012075 (+)
G156157 NA non-coding upstream 373488 4953074 ~ 4953274 (+)
G156204 NA non-coding downstream 114767 5441738 ~ 5441999 (+)
G156209 NA non-coding downstream 157793 5484764 ~ 5485045 (+)
G156215 NA non-coding downstream 274134 5601105 ~ 5601659 (+)
G156225 NA non-coding downstream 275361 5602332 ~ 5611273 (+)
G156233 NA non-coding downstream 318910 5645881 ~ 5648574 (+)
G156188 NA other upstream 169362 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 689472 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 1394599 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1712271 3611018 ~ 3614491 (+)
G155776 NA other upstream 2571650 2738361 ~ 2755112 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 1766536 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2045405 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2273596 7600567 ~ 7606668 (+)
G157055 NA other downstream 3242959 8569930 ~ 8570877 (+)
G157383 NA other downstream 4613858 9940829 ~ 9941805 (+)

Expression


Co-expression Network