G156731 (LOC108437702,LOC108264175)


Basic Information

Item Value
gene id G156731
gene name LOC108437702,LOC108264175
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 7351997 ~ 7412688 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU212484
TGTGTGGTATCtttgGTTTCTCATAGTTTgtgcagtgtgtatgtgtggtatgTTTGGTGCAGTGAGTgtgcatgaataaaaaacacaacaagagCGTTAGATAAGAATAAGGCATGTTATAAGACATTAATGTCAAAGAGTAAAACAAATATAAGGCCATATTTGTATAAAGGTGTAATGGTAAGCTGaagcgtgtgtgtctgtgtgtgtacacgGATCCTATTCCGCTCTAAACCAGTCAGACCAGTTACGTGATGCAAATAAATTTACAGTTCATGCAGAAAGGCGCTTGAACAGGTgttgtgtgtgcatgcacacatTTGTAATGCCACAGCCTTCTTAATATTTACAACATGCCCTAGAGCAAAGAAAGGAATCGGATCTATATCCTACATCCACACCCATTGTGGCACTCCCAGCTCCCGTCTTCTCCTTCACAGATCTCTGAGTGTGGCCTTTAGCTGCATCCATAACACATTAGcgtttaattaaaacatttaaaaagttccACTCACTCCATATGtacactatatgaacaaaagtataGGAATACCAGTGCATTcattgatttttagtttttaggtaTTAAGGTATtaattgtctctactgtccaattAAGATTGTTGTGAAGTCGGAATGTTGGATCACCTTTAGACCTgtcattataattatatttgccTACCTCGATATTaccaattatatatttttcaaggGACAGCCCATTAACGCGAGTGAGCTGGTATGTTGACCTTATTAAAAACAGCGATccaatgaatgtatttattagattttattttataaatttatgtaggctatttaaatttttttttatacctgaAAACTCTTATGAATTGAAAGTTAAGcatactttttaaatgtgtaaatgtgttattatgccactgtattattattattattataagatggCTTAAACAGCTCTTAAAAATAACCACTCACCACATTCCCAACTCTTCAACCCTACAGCTCACCCATaatcaaaagtattggatggagaaCCATCATTGCAGacacaatacagctctggaaaaaataagagaccacttaaaaatgagtttcttagattttttgtcaaattaaaaacctctggaatatgaacaagaggaagatggatgaaaccgagctaaactgcttgcatttttgcaccaggagtggcataaaattgtgaagatgcatgaaaactctgattaaaaaggttattccacaaaatattgatttctgtactttatgaacatgaaattgttttctttgctttatttgaggtctgaaagctctgcaccttttttgtttgtttctgcaaataaatgatctaaatgacaaaatgttatttggaatttgggagaaatgttgtctgtagtttatagaattaaacaacaatgtttattttactcaaaaataaacctataaatagcaaaatcagagaaaccgattcagaaactggagtggtcttttaattttttccagagctgtatgttttataGCTCCACAGCAATTTACATGCCTACCTtgtattaggcatggtgccagtatacaggttcatgtttatctgctctagagAGTCTTATTCTTTTGGCAACAcgtctctacagggactagacaaccTGCACATTTGTGACAGGTGACAGCATTGGGTACAATTACagtaaagtagctgaatgcattcattacaaGGGGTGTCCACAAGCTTTTGCACATAtagtgtacttaagtactagTTAAGTAATCTCTAATACTTAACTGTGTTCCTGTGGTTTCAGATGTTTGCAACTGTTTGCAGCTGTTTGCTGTAATGTAATAGGCTGAAGTACAATACATTGCATAGTTAATAACAGCAGTAGCATCTTGTCAAGTGAATTCGAGTCCAGCATGCTTGTACATTGGCAAACTTAATGAGATACTGATGCAATGTCCACTGCActgttcagctaatgccacttACACAAACACTGACATTCTATTCAGTCAAAGGTATGCATAACtgtatttatatgtgtgtgtgtgtgtgtttgactgtgtgtgtgtttttctgtgtaatcAATCCAGCATCTCCTTGGCTTCAGTTCTCgagcatgtatgtgtgtgtgtgtgtgtgtgttactgcgTCAGAGCAGATATCAGATCGTCCAGTGGCGCAGTCTCTGAGGGTTCCAGCAGTCTGAAGGTGTGACTGAACGTGATGAAGTGTGTGAACAGAGTGTTAAGGTGTGGGTGTATCTCCATGGTGATGGCGTCCCGATAGTGTGCGCTGTACAGGTGAGCGAATGTtcggaacagcagcaggaacaCCTTCTGGACCAGAAACATGAATCCAGGTGGAAACTGTGCAt

Function

NR:

description
PREDICTED: MOB kinase activator 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212484 True 2345 lncRNA 0.37 2 7351997 7412688

Neighbor

gene id symbol gene type direction distance location
LOC103040627 NA coding upstream 36442 7274953 ~ 7315555 (+)
fkbp4 fkbp4,LOC107735478,LOC107662895,LOC107686573,LOC107705800,LOC107564896 coding upstream 80086 7263863 ~ 7271911 (+)
washc1 wash1,LOC103045331,LOC107686618,LOC107564895 coding upstream 110015 7230927 ~ 7241982 (+)
LOC103039382 otogl,LOC107736094,LOC107686601,LOC107662850,LOC107600679 coding upstream 264414 7031903 ~ 7087583 (+)
LOC103045026 LOC108424689 coding upstream 326052 7017514 ~ 7025945 (+)
LOC103026191 dnaja2l,dnaja2,LOC103026191,LOC108438176,LOC107735561,LOC107705812,LOC107686561 coding downstream 33455 7446143 ~ 7454434 (+)
LOC103026791 NA coding downstream 112437 7525125 ~ 7540255 (+)
LOC103028022 LOC103028022 coding downstream 159463 7572151 ~ 7581205 (+)
vwf vwf coding downstream 201271 7613959 ~ 7655049 (+)
LOC103029157 LOC108439094 coding downstream 243813 7656501 ~ 7689174 (+)
G156697 ddx11,LOC107686596 non-coding upstream 103537 7245764 ~ 7248460 (+)
G156623 gcsh,LOC105912338,LOC107662900,LOC100702337,LOC107564915,LOC102203905,LOC102786853 non-coding upstream 321289 7026598 ~ 7030708 (+)
G156562 NA non-coding upstream 482433 6868260 ~ 6869564 (+)
G156523 pdpr,LOC106595780 non-coding upstream 577265 6768942 ~ 6774732 (+)
G156499 NA non-coding upstream 680803 6670921 ~ 6671194 (+)
G156824 utp15,LOC107559694,LOC107686557,LOC107662854 non-coding downstream 140965 7553653 ~ 7558957 (+)
G156856 pdp2,LOC108423909 non-coding downstream 339515 7752203 ~ 7755664 (+)
G156916 NA non-coding downstream 424067 7836755 ~ 7938030 (+)
LOC107197497 NA non-coding downstream 426038 7838726 ~ 7839633 (+)
LOC107197499 NA non-coding downstream 428969 7841657 ~ 7844823 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 180372 7093507 ~ 7171625 (+)
G156188 NA other upstream 2194597 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 2714707 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 3419834 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 3737506 3611018 ~ 3614491 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 187879 7600567 ~ 7606668 (+)
G157055 NA other downstream 1157242 8569930 ~ 8570877 (+)
G157383 NA other downstream 2528141 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 3160055 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 3288100 10700788 ~ 10713982 (+)

Expression


Co-expression Network