G157210


Basic Information

Item Value
gene id G157210
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 8892090 ~ 8894941 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU213140
ggctgcgtccagaaacttttgctactcctcctctcctactcctcctttcctactcctcctctcctaccccggaagaaggtggaggaatcgaggagaggagaggaggaggaatggagggaaggagctgtaattggggaaatgggacagctgatcccttttagataggatgttgactaccgttgaactgagccaatcacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213140 True 200 lncRNA 0.52 2 8892090 8894941

Neighbor

gene id symbol gene type direction distance location
LOC103030146 impdh1,impdh1a,LOC108442450,LOC107559456,LOC107665545,LOC107710381,LOC107599814,LOC106561215,LOC103030146 coding upstream 20692 8844976 ~ 8871398 (+)
LOC103043520 NA coding upstream 55477 8831429 ~ 8836613 (+)
LOC111194761 NA coding upstream 65632 8820102 ~ 8826458 (+)
prpf18 prpf18,LOC107671164,LOC107719961 coding upstream 326592 8555188 ~ 8565498 (+)
cpt1b cpt1b,LOC100329197,LOC107599889,LOC107671150,LOC107686536 coding upstream 358923 8520018 ~ 8533167 (+)
LOC103031618 NA coding downstream 2636 8897577 ~ 8902959 (+)
rbm28 NA coding downstream 9794 8904735 ~ 8919978 (+)
LOC111194832 NA coding downstream 215153 9110094 ~ 9114054 (+)
LOC111194762 NA coding downstream 219038 9113979 ~ 9116076 (+)
lrrc4 lrrc4.2,LOC103033525,LOC108442864,LOC108263937,LOC107559378,LOC107594935,LOC107738417,LOC107672593,LOC107673147,LOC107723939 coding downstream 399632 9294573 ~ 9299415 (+)
G157069 NA non-coding upstream 208987 8680809 ~ 8683103 (+)
G157064 frmd4a non-coding upstream 284069 8603589 ~ 8608021 (+)
G157054 NA non-coding upstream 323627 8568244 ~ 8568463 (+)
G157052 NA non-coding upstream 324422 8566429 ~ 8567668 (+)
G157027 NA non-coding upstream 453821 8432614 ~ 8438269 (+)
G157224 NA non-coding downstream 53884 8948825 ~ 8949097 (+)
G157226 NA non-coding downstream 71230 8966171 ~ 8966371 (+)
G157305 NA non-coding downstream 448890 9343831 ~ 9344700 (+)
G157311 NA non-coding downstream 498361 9393302 ~ 9393516 (+)
G157312 NA non-coding downstream 609133 9504074 ~ 9507133 (+)
G157055 NA other upstream 321213 8569930 ~ 8570877 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 1285422 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 1460522 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 1720465 7093507 ~ 7171625 (+)
G156188 NA other upstream 3734690 5157154 ~ 5157400 (+)
G157383 NA other downstream 1045888 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 1677802 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 1805847 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 1856758 10751699 ~ 10754698 (+)
hipk2 hipk2,LOC107722467 other downstream 2136124 11031065 ~ 11143471 (+)

Expression


Co-expression Network