G157226


Basic Information

Item Value
gene id G157226
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 8966171 ~ 8966371 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU213185
aacaagtaaacacgtaacaaagataataaaccaaaataaacgagggggactagagaacataaataaactagagataatgaaaataataaacaaaaagggaatatatacaaggatctagggaacatgaaataaaacaagaaactagaaataaacaaggaaataaactataaacgagaaaacaagaaacaaggaactaaggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213185 True 201 lncRNA 0.28 1 8966171 8966371

Neighbor

gene id symbol gene type direction distance location
rbm28 NA coding upstream 46193 8904735 ~ 8919978 (+)
LOC103031618 NA coding upstream 63212 8897577 ~ 8902959 (+)
LOC103030146 impdh1,impdh1a,LOC108442450,LOC107559456,LOC107665545,LOC107710381,LOC107599814,LOC106561215,LOC103030146 coding upstream 94773 8844976 ~ 8871398 (+)
LOC103043520 NA coding upstream 129558 8831429 ~ 8836613 (+)
LOC111194761 NA coding upstream 139713 8820102 ~ 8826458 (+)
LOC111194832 NA coding downstream 143723 9110094 ~ 9114054 (+)
LOC111194762 NA coding downstream 147608 9113979 ~ 9116076 (+)
lrrc4 lrrc4.2,LOC103033525,LOC108442864,LOC108263937,LOC107559378,LOC107594935,LOC107738417,LOC107672593,LOC107673147,LOC107723939 coding downstream 328202 9294573 ~ 9299415 (+)
LOC103035018 grm3,LOC108444204,LOC108263977,LOC107671160,LOC107665551,LOC107559415 coding downstream 1499418 10465789 ~ 10529492 (+)
cmip cmip,LOC107684659,LOC106573687,LOC106560887 coding downstream 1629031 10595402 ~ 10628479 (+)
G157224 NA non-coding upstream 17074 8948825 ~ 8949097 (+)
G157210 NA non-coding upstream 71230 8892090 ~ 8894941 (+)
G157069 NA non-coding upstream 283068 8680809 ~ 8683103 (+)
G157064 frmd4a non-coding upstream 358150 8603589 ~ 8608021 (+)
G157054 NA non-coding upstream 397708 8568244 ~ 8568463 (+)
G157305 NA non-coding downstream 377460 9343831 ~ 9344700 (+)
G157311 NA non-coding downstream 426931 9393302 ~ 9393516 (+)
G157312 NA non-coding downstream 537703 9504074 ~ 9507133 (+)
G157334 NA non-coding downstream 618835 9585206 ~ 9590572 (+)
G157387 NA non-coding downstream 1061148 10027519 ~ 10027906 (+)
G157055 NA other upstream 395294 8569930 ~ 8570877 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 1359503 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 1534603 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 1794546 7093507 ~ 7171625 (+)
G156188 NA other upstream 3808771 5157154 ~ 5157400 (+)
G157383 NA other downstream 974458 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 1606372 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 1734417 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 1785328 10751699 ~ 10754698 (+)
hipk2 hipk2,LOC107722467 other downstream 2064694 11031065 ~ 11143471 (+)

Expression


Co-expression Network