G157437


Basic Information

Item Value
gene id G157437
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 10220666 ~ 10220969 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU213456
agtggggttagctgcgttggagctgtagttagtttcactttcaaaagtggaatcccatgtaaatccagctcttagtgtcctcctcagagcaaaataaaaagagcaagagagcactgaaacgaatctcgctggtaatccgtcctcttccacgccacagtaacttctggaacttctgaatatgctgccatgttttttttttttaagttcggttcaatttaaatgtattagtttggttccgaaactgaaatgtaaagaatttaacttggatcaaggtgaataattaatattgggtcgagtgaagtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213456 True 304 lncRNA 0.38 1 10220666 10220969

Neighbor

gene id symbol gene type direction distance location
lrrc4 lrrc4.2,LOC103033525,LOC108442864,LOC108263937,LOC107559378,LOC107594935,LOC107738417,LOC107672593,LOC107673147,LOC107723939 coding upstream 921251 9294573 ~ 9299415 (+)
LOC111194762 NA coding upstream 1104590 9113979 ~ 9116076 (+)
LOC111194832 NA coding upstream 1106612 9110094 ~ 9114054 (+)
rbm28 NA coding upstream 1300688 8904735 ~ 8919978 (+)
LOC103031618 NA coding upstream 1317707 8897577 ~ 8902959 (+)
LOC103035018 grm3,LOC108444204,LOC108263977,LOC107671160,LOC107665551,LOC107559415 coding downstream 244820 10465789 ~ 10529492 (+)
cmip cmip,LOC107684659,LOC106573687,LOC106560887 coding downstream 374433 10595402 ~ 10628479 (+)
tmem5 tmem5,LOC107722461,LOC107738400,LOC107587049,LOC107559810 coding downstream 537271 10758240 ~ 10764110 (+)
srgap1 srgap1,srgap1a,LOC107670373,LOC108264626,LOC107684655 coding downstream 545046 10766015 ~ 10901559 (+)
LOC103045650 NA coding downstream 681984 10902953 ~ 10912967 (+)
G157388 sema3a,sema3ab,LOC108264812 non-coding upstream 166691 10048811 ~ 10053975 (+)
G157387 NA non-coding upstream 192760 10027519 ~ 10027906 (+)
G157334 NA non-coding upstream 630094 9585206 ~ 9590572 (+)
G157312 NA non-coding upstream 713533 9504074 ~ 9507133 (+)
G157311 NA non-coding upstream 827150 9393302 ~ 9393516 (+)
G157483 NA non-coding downstream 285948 10506917 ~ 10534978 (+)
G157513 NA non-coding downstream 438824 10659793 ~ 10660427 (+)
G157523 NA non-coding downstream 479188 10700157 ~ 10700372 (+)
G157540 LOC103039511,LOC100702099,LOC100707594,LOC105905159,LOC108412826,LOC105889141,LOC102291458 non-coding downstream 534110 10755079 ~ 10756662 (+)
G157546 NA non-coding downstream 660761 10881730 ~ 10882468 (+)
G157383 NA other upstream 278861 9940829 ~ 9941805 (+)
G157055 NA other upstream 1649789 8569930 ~ 8570877 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 2613998 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 2789098 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 3049041 7093507 ~ 7171625 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 351774 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 479819 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 530730 10751699 ~ 10754698 (+)
hipk2 hipk2,LOC107722467 other downstream 810096 11031065 ~ 11143471 (+)
LOC103031933 ttc38,LOC103031933,LOC108414465,LOC104940279,LOC106573176,LOC100694777,LOC107722483,LOC107673144 other downstream 2119037 12340006 ~ 12366770 (+)

Expression


Co-expression Network