G158644 (fam192a)


Basic Information

Item Value
gene id G158644
gene name fam192a
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 15936078 ~ 15942262 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU215049
GCGCCGTTTAACTGCCCCGGCAAGTAGGTGCGCCTGAGACAAGTGGCTTGTCTTGTGTTCAGGGGGTTTGGGTCCTGCCCTTTTCTCCGGTTCCTTCTTCTGGCTCTCACTGGCTGCCAGCTTCTTCAGAGCACTCCTATATTCCTGGATCTCTTGGTGGTCCTCATCTCTCCTTTGTTTCTCAACAAGAGATTGCTGCCGTGAAACTTCATCCAGAAAGTTAGTCTCATCCTCATCCAGGCCTTTCACCATGTTCTTAAATTTAAATTGCTCCTCATACTCCTCCTGCTTCTTATCCTTCTGCTCCTGCAGTCTCTCGAACAGCGAGCGGGGATCATACTCTTCCTCTGGGACCTCTTCAGGATCATCTGGCATGCGAACCTTTTCCCATTCCTCCTGAcgtttcttcctcttctcttccaACTCAGACTCTGAAACAAACTTCCGG

Function

NR:

description
PREDICTED: protein FAM192A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215049 True 448 lncRNA 0.50 4 15936078 15942262

Neighbor

gene id symbol gene type direction distance location
cpne2 cpne2,LOC107583787,LOC107740309 coding upstream 3612 15878898 ~ 15932466 (+)
nlrc5 NA coding upstream 60843 15851856 ~ 15875235 (+)
cetp cetp coding upstream 89388 15833153 ~ 15846690 (+)
herpud1 NA coding upstream 103038 15823719 ~ 15833040 (+)
slc12a3 slc12a3,LOC107583876 coding upstream 113739 15808189 ~ 15822339 (+)
rspry1 rspry1,LOC107583786,LOC107672266 coding downstream 5324 15947586 ~ 15959406 (+)
LOC103038143 NA coding downstream 17887 15960149 ~ 15968090 (+)
LOC111194834 NA coding downstream 293918 16236180 ~ 16236963 (+)
cbln1 cbln1,LOC107549644,LOC107583779 coding downstream 332417 16274679 ~ 16285044 (+)
LOC107197482 LOC102776007 coding downstream 564634 16506896 ~ 16511309 (+)
G158641 NA non-coding upstream 26787 15909003 ~ 15909291 (+)
G158640 NA non-coding upstream 28178 15907153 ~ 15907900 (+)
G158627 NA non-coding upstream 128545 15807319 ~ 15807533 (+)
G158624 NA non-coding upstream 163638 15772226 ~ 15772440 (+)
G158582 NA non-coding upstream 351084 15583441 ~ 15584994 (+)
LOC111194770 NA non-coding downstream 27024 15969286 ~ 15986748 (+)
G158651 NA non-coding downstream 34590 15976852 ~ 15978946 (+)
G158652 NA non-coding downstream 36764 15979026 ~ 15979369 (+)
G158776 NA non-coding downstream 348514 16290776 ~ 16291007 (+)
G158786 lonp2 non-coding downstream 632422 16574684 ~ 16575374 (+)
LOC103041352 NA other upstream 159912 15775424 ~ 15776166 (+)
LOC107197617 NA other upstream 164133 15771295 ~ 15771945 (+)
LOC103041858 NA other upstream 167417 15768055 ~ 15768661 (+)
c18h11orf16 NA other upstream 620526 15306212 ~ 15315552 (+)
LOC111194769 NA other upstream 798808 15128368 ~ 15137270 (+)
G158779 NA other downstream 436997 16379259 ~ 16379823 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other downstream 600616 16542878 ~ 16571458 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other downstream 711874 16654136 ~ 16725209 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other downstream 837244 16779506 ~ 16798400 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other downstream 1159350 17101612 ~ 17172228 (+)

Expression


Co-expression Network