G158779


Basic Information

Item Value
gene id G158779
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 16379259 ~ 16379823 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU215237
tgTCTCGATGTGGATGAGTTCTCATCACCTAAAACTCAACCCCAGcaagactgaccttctgttCATCCCAGGAACTACGAGCCTTCACAACAATATCTCCATCTCTTTCGAcaactcactggtcactccatcggCAGAAGCACGAAGCCTCGGtgtagtaatggatgaccagttatcattctcgagccatattgcaaatctgactcggtgctgcagatttctcctgtacaacatccgaagaattcgaccgtttctgtctcaggaagccactcaggtgcttgtgcagtctcttgtcatctcaagacttgactactgcaactctctactggctggtcttccactgagagccaccaaaccactacaattatttcagaatgctgcagcacgactcgtcttcaatcttccgaagttcagtcatgtgactcctttgctgcgttccctccactggcttcctgttgccgcccgcatccgattcaaaaccctgacgctggcctacaaggcaaaaaacggaccagctccttcatacttgatggcgatggtcaaagccagatctgcaccaagagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215237 True 565 TUCP 0.49 1 16379259 16379823

Neighbor

gene id symbol gene type direction distance location
cbln1 cbln1,LOC107549644,LOC107583779 coding upstream 94215 16274679 ~ 16285044 (+)
LOC111194834 NA coding upstream 142296 16236180 ~ 16236963 (+)
LOC103038143 NA coding upstream 411169 15960149 ~ 15968090 (+)
rspry1 rspry1,LOC107583786,LOC107672266 coding upstream 419853 15947586 ~ 15959406 (+)
cpne2 cpne2,LOC107583787,LOC107740309 coding upstream 446793 15878898 ~ 15932466 (+)
LOC107197482 LOC102776007 coding downstream 127073 16506896 ~ 16511309 (+)
n4bp1 NA coding downstream 132511 16512334 ~ 16530595 (+)
trnal-cag_11 NA coding downstream 383703 16763526 ~ 16763608 (+)
pllp pllp coding downstream 384209 16764032 ~ 16773000 (+)
hacd3 hacd3,LOC107738726,LOC107686290,LOC107672296,LOC107596982,LOC107583769,LOC107742880 coding downstream 462838 16842661 ~ 16852459 (+)
G158776 NA non-coding upstream 88252 16290776 ~ 16291007 (+)
LOC111194770 NA non-coding upstream 392511 15969286 ~ 15986748 (+)
G158652 NA non-coding upstream 399890 15979026 ~ 15979369 (+)
G158651 NA non-coding upstream 400313 15976852 ~ 15978946 (+)
G158644 fam192a non-coding upstream 436997 15936078 ~ 15942262 (+)
G158786 lonp2 non-coding downstream 194861 16574684 ~ 16575374 (+)
G158793 NA non-coding downstream 208104 16587927 ~ 16588472 (+)
G158823 aars non-coding downstream 348633 16728456 ~ 16730115 (+)
G158818 NA non-coding downstream 358649 16738472 ~ 16738877 (+)
G158837 arl2bp,LOC107549653,LOC107686354,LOC107672193 non-coding downstream 394857 16774680 ~ 16777218 (+)
LOC103041352 NA other upstream 603093 15775424 ~ 15776166 (+)
LOC107197617 NA other upstream 607314 15771295 ~ 15771945 (+)
LOC103041858 NA other upstream 610598 15768055 ~ 15768661 (+)
c18h11orf16 NA other upstream 1063707 15306212 ~ 15315552 (+)
LOC111194769 NA other upstream 1241989 15128368 ~ 15137270 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other downstream 163055 16542878 ~ 16571458 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other downstream 274313 16654136 ~ 16725209 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other downstream 399683 16779506 ~ 16798400 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other downstream 721789 17101612 ~ 17172228 (+)
zwilch zwilch other downstream 797852 17177675 ~ 17189251 (+)

Expression


Co-expression Network