map2k1 (map2k1,LOC107596971,LOC107583767,LOC107686295)


Basic Information

Item Value
gene id map2k1
gene name map2k1,LOC107596971,LOC107583767,LOC107686295
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 17101612 ~ 17172228 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU215388
CAATACACACAcacacacacacacatatacacacacaccagtgttTCTATATGGgctcaaatttgaaaatcaGTTTCCCAGTCAGTTCAGTAACCAATCACTGCCTCTTTTAACCCCTTCACACTGATGTCATAAGTATTGTGATGAGGTCATGCTGAGATAAAACAGgctgctgtaataatcagcctATAAGGTCTGCATTCAGCAGCAAAGccttttacagtgtgaaaacactccatttcattaaaaacattaatttggtCCTGGTGAATGATACACAAACTATGATTGAACTATGAAAATGCGTGACAAATTGGCCCATATGTATATGATAATGTGTTTGCTGCTGGATGTATCAAAtgatctatatttatatttctaaagGGTAAACAGTAAGTGAATCCCAGCTGAACTGTTTAGTCCCTGAGCCTAAAAAATCCTTGCTGCTCTCCTGGGAACACAAAAGCCATCACCTGCATGCCGGTACTGCAGGAATTCATTGCCAAGTGAGTTGTTAAAAGTGAACAAACCAAggccattttttttacacaggctAAAATGCTCACATCAGTTTTGCTTTATTTTCCTCTAAGCAGtcagtgtattttgtattgGAGCAATGGTGTGTTAACTAAGTCAGtataaaatagatataaatgtCATCTAAATTGAGATGGCAAAACTCTTTTATTTGCCGTTGTTAAAAATTTCTGCATCACTGTCTGTTTGAACTTGCTGTTGTGGCTAACTTTGCTGGAAATATGCCTCTTTTGTATCTGTATTCTAAAGTTTGTTTTACTATGCTGAAATGTAATTAGACAGACAGATTTTATAAGTTTTACATCAGTTCAAACCAACCAGCAACTAACCAGTTCCTCCTGTAGCCATGTGCTATTGCAAAGGGTTGGGATCACTTAATAAAATTGTAGACAGGAAAAATGCTCCTCCTTAATAAGCATTACAATAGAAATGATAGGAAGATAACTGTATGGGTGTCATCAAACTGTTACTGTCGGTTACAGCTGCAGTCCACGTTTTCTGCTTGACACATTATTCTTCCATTACAGTGCTTTTAACACCAAAGCTCATTTCCAATGGGAGCCCTCACTGATATACATcgatttttattacttttaatatgtgtaatattttttctttacctttccTTTTACTTTAAGTGTGAAGTCTGTGCAGGCCTTTAATGTTGTCATTTGAGAAAATTACTGCAACTATAAATTggtataaattataataaacaggatttatttaact
>XM_007249157.3
CCATATCAGTGCGGTATTGGTGTAtattgtgtttctgtctgtaCAGGGGGCTGAGCAGTGCTGTGCTAGTCGCCGAGGAGAGCGCGTGCCTGTTTTAATAGTCTACTTTATTTATCTCGCGTTGtcgtgtttgtgtgcatttttcTCAGACAGCCACTGGGTGTGATTAGCTGTATATATACCCTATGCATCAGACCGCTCTCTCTACAGCAGCACGCGGGTATTTCTGCGGATCAGCCTTCTTCCCTTGATTTATTTCTGATTGCTAAACTGCAAGACATCAAGAGTCGTAATGCAGAAACGAAGGAAGCCAGAACCGATCCAGCTCAACCCAATTCCTGATGGGAACGCCGTTAACGGAACCGGTGCCTCGGAaacAAACCTAGAGGCCCTGCAGAAGAagctggaggagctggagctggacgAGCAGCAGAAGAAGCGTCTAGAGGCCTTCCTCACGCAGAAACAGAAAGTTGGGGAGCTGAAGGACGATGACTTTGAGAAGATTTGTGAGCTGGGTGCCGGAAACGGTGGAGTGGTCTTCAAGGTTTCACATAGACCCTCTGGACTCATCATGGCCAGGAAGCTGATCCATTTGGAGATCAAGCCTGCCATCAGGAACCAGATCATCCGGGAGCTGCAAGTCCTGCATGAGTGTAATTCCCCTTACATTGTGGGCTTCTATGGGGCGTTCTACAGTGATGGCGAGATCAGCATCTGTATGGAGCACATGGACGGTGGCTCCCTGGACCAGTCTCTGAAGAAAGCAGGCAAGATTCCAGAGCAAATATTGGGCAAAGTTAGCATTGCGGTGATAAAAGGGCTCTCCTACCTTAGAGAGAAACATAAGATCATGCACAGAGATGTGAAGCCGTCTAACATCCTGGTGAACTCGCGGGGAGAGATTAAGCTGTGTGACTTCGGCGTGAGTGGACAGCTTATCGACTCCATGGCCAACTCATTTGTGGGCACCAGATCCTACATGTCTcCGGAGCGTCTGCAGGGCACTCACTACTCTGTGCAGTCTGATATCTGGAGCATGGGTCTCTCCCTGGTGGAGATGGCGATTGGGCGCTTCCCCATTCCACCGCCTGATGCTAAAGAACTGGAGCAGATCTTTGGCCTCCCCATGGAAGGAGACCCCTCGTCCAGCGAGGCCTCCCCCAAACCCAGGCCCCCTGGCCGGCCCAGCAGCTCGTACGGACCAGACAGTAGACCCCCAATGGCCATCTTTGAGCTGCTAGACTACATCGTGAATGAGCCACCGCCCAAGCTACCAGGCATCTTTGGCACCGAATTTCAGGATTTTGTTAACAAATGcttaATCAAAAATCCTGCAGAGAGAGCAGATCTGAAGCAACTGATGGTACACTCCTTCATAAAGAAGTCAGAGGCTGAAGAAGTGGACTTTGCTGGGTGGTTGTGCACCACCATCGGCTTAAATCAGCCAGGGACACCAACGCACAGTGTGGGGATGTAAGTGAGGGATTCCCCTGATAAAGATAAATATCgtcactgtcatgcaaaaatcCAAAATGCAATTTTGCAGACAAAGGAAAAAGTCCTACATTTCAAtggaggtcaatgtaaaaaatattttattttatcttggaacatttctattggttctttATTGGATTTAGACACAGTGTAAATTTGCCAGATACTAAATCTGTTAAAAAGTACATATATTTTGTGCGGCAGtgacaatacacacacacacacacaccacacacacacacatatacacacacaccagtgttTCTATATGGgctcaaatttgaaaatcaGTTTCCCAGTCAGTTCAGTAACCAATCACTGCCTCTTTTAACCCCTTCACACTGATGTCATAAGTATTGTGATGAGGTCATGCTGAGATAAAACAGgctgctgtaataatcagcctATAAGGTCTGCATTCAGCAGCAAAGccttttacagtgtgaaaacactccatttcattaaaaacattaatttggtCCTGGTGAATGATACACAAACTATGATTGAACTATGAAAATGCGTGACAAATTGGCCCATATGTATATGATAATGTGTTTGCTGCTGGATGTATCAAAtgatctatatttatatttctaaagGGTAAACAGTAAGTGAATCCCAGCTGAACTGTTTAGTCCCTGAGCCTAAAAAATCCTTGCTGCTCTCCTGGGAACACAAAAGCCATCACCTGCATGCCGGTACTGCAGGAATTCATTGCCAAGTGAGTTGTTAAAAGTGAACAAACCAAggccattttttttacacaggctAAAATGCTCACATCAGTTTTGCTTTATTTTCCTCTAAGCAGtcagtgtattttgtattgGAGCAATGGTGTGTTAACTAAGTCAGtataaaatagatataaatgtCATCTAAATTGAGATGGCAAAACTCTTTTATTTGCCGTTGTTAAAAATTTCTGCATCACTGTCTGTTTGAACTTGCTGTTGTGGCTAACTTTGCTGGAAATATGCCTCTTTTGTATCTGTATTCTAAAGTTTGTTTTACTATGCTGAAATGTAATTAGACAGACAGATTTTATAAGTTTTACATCAGTTCAAACCAACCAGCAACTAACCAGTTCCTCCTGTAGCCATGTGCTATTGCAAAGGGTTGGGATCACTTAATAAAATTGTAGACAGGAAAAATGCTCCTCCTTAATAAGCATTACAATAGAAATGATAGGAAGATAACTGTATGGGTGTCATCAAACTGTTACTGTCGGTTACAGCTGCAGTCCACGTTTTCTGCTTGACACATTATTCTTCCATTACAGTGCTTTTAACACCAAAGCTCATTTCCAATGGGAGCCCTCACTGATATACATcgatttttattacttttaatatgtgtaatattttttctttacctttccTTTTACTTTAAGTGTGAAGTCTGTGCAGGCCTTTAATGTTGTCATTTGAGAAAATTACTGCAACTATAAATTggtataaattataataaacaggatttatttaactgaaa

Function

symbol description
map2k1 Predicted to enable MAP kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in cardiac ventricle. Human ortholog(s) of this gene implicated in carcinoma (multiple); cardiofaciocutaneous syndrome 3; high grade glioma; and melorheostosis. Orthologous to human MAP2K1 (mitogen-activated protein kinase kinase 1).

NR:

description
dual specificity mitogen-activated protein kinase kinase 1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04368 MAP2K1, MEK1; mitogen-activated protein kinase kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU215388 False 1272 lncRNA 0.36 2 17101612 17172224
XM_007249157.3 True 2994 mRNA 0.43 11 17149820 17172228

Neighbor

gene id symbol gene type direction distance location
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding upstream 170250 16921369 ~ 16931362 (+)
slc24a1 slc24a1,LOC107738725,LOC107596980,LOC107742879,LOC107686291 coding upstream 217457 16859892 ~ 16884155 (+)
hacd3 hacd3,LOC107738726,LOC107686290,LOC107672296,LOC107596982,LOC107583769,LOC107742880 coding upstream 249153 16842661 ~ 16852459 (+)
pllp pllp coding upstream 328612 16764032 ~ 16773000 (+)
trnal-cag_11 NA coding upstream 338004 16763526 ~ 16763608 (+)
LOC107197433 NA coding downstream 122979 17295207 ~ 17301682 (+)
LOC103027004 smad3,LOC108424035,LOC105892538,LOC103353199,LOC107740443 coding downstream 252990 17425218 ~ 17447793 (+)
iqch NA coding downstream 285787 17458015 ~ 17492931 (+)
c18h15orf61 cunh15orf61,c4h15orf61,LOC103025902,LOC107738714,LOC107583911,LOC107718314,LOC107686305,LOC107596966 coding downstream 321565 17493793 ~ 17498771 (+)
LOC103029280 skor1 coding downstream 391647 17563875 ~ 17571917 (+)
G158881 NA non-coding upstream 17351 17083953 ~ 17084261 (+)
G158878 NA non-coding upstream 17874 17079112 ~ 17083738 (+)
G158877 megf11 non-coding upstream 102573 16998804 ~ 16999039 (+)
G158876 NA non-coding upstream 106194 16995117 ~ 16995418 (+)
G158875 NA non-coding upstream 112561 16988770 ~ 16989051 (+)
G158882 rpl4 non-coding downstream 839 17173067 ~ 17177192 (+)
G158991 NA non-coding downstream 111239 17283467 ~ 17283882 (+)
G159014 NA non-coding downstream 276604 17448832 ~ 17451332 (+)
G159017 aagab non-coding downstream 283087 17455315 ~ 17456977 (+)
G159028 NA non-coding downstream 423831 17596059 ~ 17599354 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other upstream 303212 16779506 ~ 16798400 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other upstream 376403 16654136 ~ 16725209 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other upstream 530154 16542878 ~ 16571458 (+)
G158779 NA other upstream 721789 16379259 ~ 16379823 (+)
LOC103041352 NA other upstream 1325446 15775424 ~ 15776166 (+)
zwilch zwilch other downstream 5447 17177675 ~ 17189251 (+)
smad6 smad6,smad6b,LOC107583766,LOC107672304,LOC107596967,LOC107738716,LOC107686299 other downstream 154872 17327100 ~ 17372206 (+)
rapsn rapsn other downstream 798868 17971096 ~ 17985904 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other downstream 1353300 18525528 ~ 18576437 (+)
G159666 NA other downstream 3013288 20185516 ~ 20186919 (+)

Expression


Co-expression Network