CI01000012_09974294_09974754



Basic Information


Item Value
gene id CI01000012_09974294_09974754
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 9973339 ~ 9975056 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000012_09974294_09974754.mRNA
AGGTTGTGGGATGATTGAGAGAGCACGAGTTGGACAGTTTAGTGAAGCGGAGTGTATCTTAAACTGGGGTTCACAGCAAGGCCATGTTCATAAGGCTTGTCAATCAGGTGTGTTTTCACACATTTCACTTGTGCAAACCCAACATGCTTTGCTCTGTGTCTTTTGACACTTTACCTTAATCGCGTTTAGATTGGCATCTTGGTGTGTATTGTTGGTATAATATTTGGATATTCTGTGTGTACATGTATTTTTACTCGTGCCCCATCTTCTGTGCCCCAAGTGTCTTATTCGCTGATGGACAGATGGACGGCACGGCCGACCTCACTCTCACCTTTCTGCTCACTCAGCTCCGGTCCACCTCCCTGCTCCGATTAGCAGCAATGGGGTTGGCTAGCGCCCTATCACAGTGTGGCTCATGTTTACGAGGATTAAGGAAACAGATGGACGGCCATGCTGACTGGTGTGGCTTCATTAACTCTCCGCGCGACCGTTCTAAACTCCGCCGCCCCTGCACGTCCCGCTCCGGAGTGCTCCGCACAGAGCTGAGCCAAGACCTGAGGTCTGTGGGGAGGGGGATTGCACTCATGAAGCCTGTGAAGATGTTTATTGATCTGTAAGCTGAGATGTGGGCAGGGTGTTTCTCCTTGATTGATTAATGTTGAAGTGAAGCGGTGGGACTTTCTTTAAAGAATGATTTTTGACATCATGTTGTCAGACCAGGGTAGGGAGAGTTTTTTTTTTTCTCTCCCTGTGGAGTTCTGTATGTAATGATAGGTCTACAGTGTTGAGGTTTGTGGCTGTATGATATTAGATTTATTTATTTTTATTTAAAATATTTATATATTAATTGGTGATATTGGATATGCATTGGCTAAAATTACATATTTAATTGTTCATGCTCATTAAGGTTAACTTTGCCATTACTAACGTATTATCTAACGCTCGCTTAAAGTTAACCTTTTAAAACACTGATTTAATAACACTGTTAAGTGTAATCTTTATCAAATCTCAAAATGAATATTAATATTTTATATTGTACATTATAATAGTGTGACGCCTAACTTGTAGCTTTTAAAAAATATTGATTTTTAAGTTTTCAGGTATAAAACATATTTGATCTTTAATAGGTAGAGATGAAGCGATATTAAAATTAAAGTCAAAATAAGCTGATAATTCGACCAGCAAGCAGATAATATTTTCATGTTAGTCAAAGTCTATACTTAAAAAAATCAATCACTGTAGATACACCTACAACATTATAATATAATGCATACACCTCTTTAGCTTGTCATGTGCCGGTGATTATCGCTCCACGTGCCAATAGGTTGCCGACCCCTGACATGCAGTATGAAAAATGGATATTCATTATGAGATTTGCTAAAGATTGCAGTGCTGTTAAATAATTATTGTTTTTAAATATGAACTTTAGATGATGGCAAAGGTAATCATGTAAAAAGAATTGAGCATGAACAATTAAATATCCAATAGCAGCCAATAACAATAAATAATAATTAAAAAAAATACGTTGGCTGTTTTGAAAATTGTTTCTTGCACTGAAGATGACAGAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000012_09974294_09974754.mRNA True 1572 mRNA 0.38 2 9973339 9975056

Neighbor


gene id symbol gene type direction distance location
CI01000012_09926268_09941904 UNC5B coding downstream 30945 9926073 ~ 9942394 (-)
CI01000012_09894361_09922003 MYOFL coding downstream 50896 9893656 ~ 9922443 (-)
CI01000012_09862141_09892366 PARGA, PARG coding downstream 80973 9861875 ~ 9892366 (-)
CI01000012_09830411_09851586 OGDHL coding downstream 121469 9830165 ~ 9851870 (-)
CI01000012_09789066_09792437 LRIT1A coding downstream 180902 9787695 ~ 9792437 (-)
CI01000012_09976030_09976302 NA coding upstream 515 9975571 ~ 9976367 (-)
CI01000012_09984871_10009730 NA coding upstream 9250 9984306 ~ 10009885 (-)
CI01000012_10114837_10117992 NA coding upstream 139340 10114396 ~ 10119291 (-)
CI01000012_10119912_10169990 NA coding upstream 144856 10119912 ~ 10169990 (-)
CI01000012_10189922_10194006 NSMCE4A coding upstream 214820 10189876 ~ 10194006 (-)
G75212 NA non-coding downstream 156303 9815978 ~ 9817036 (-)
G75189 NA non-coding downstream 203830 9766445 ~ 9769509 (-)
G75004 NA non-coding downstream 331395 9641710 ~ 9641944 (-)
G75001 NA non-coding downstream 333690 9639446 ~ 9639649 (-)
G74997 NA non-coding downstream 336195 9636905 ~ 9637144 (-)
G75230 NA non-coding upstream 12309 9987365 ~ 9987685 (-)
G75645 NA non-coding upstream 110895 10085951 ~ 10086261 (-)
G75646 NA non-coding upstream 111219 10086275 ~ 10086512 (-)
G75647 NA non-coding upstream 114000 10089056 ~ 10089273 (-)
G75648 NA non-coding upstream 114949 10090005 ~ 10090218 (-)
G74982 NA other downstream 397367 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 571371 9398076 ~ 9402378 (-)
CI01000012_09082056_09083285 NA other downstream 889850 9081877 ~ 9083489 (-)
CI01000012_09071892_09073410 NA other downstream 899882 9071371 ~ 9073457 (-)
CI01000012_09068458_09070536 NA other downstream 902672 9067906 ~ 9070765 (-)
G75608 NA other upstream 636859 10611915 ~ 10620871 (-)
CI01000012_12047175_12052116 NA other upstream 2073988 12046728 ~ 12052541 (-)
CI01000012_12079581_12084139 NA other upstream 2103880 12078936 ~ 12084260 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other upstream 2979390 12954446 ~ 12957833 (-)
G77287 NA other upstream 3644220 13619276 ~ 13633819 (-)

Expression



Co-expression Network