CI01000012_09976030_09976302


Basic Information

Item Value
gene id CI01000012_09976030_09976302
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 9975571 ~ 9976367 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_09976030_09976302.mRNA
AGCAACAGCAATGCAGTAAAATGTTTTATGCACTGGAGTTTCTGTGTTGTGTTTGACCTTTACACATGAACCCGTTGGACAGGCACTCTTTACTCATCCAAAGCAGGTCATGTCTAGTCCAAGAGGCCTGGTTCCACAGTCAACGCCCTTGGAATGAGTGTCGTGGATTTTGGCTGCACCCTGACTGCTGGACTTGTTCTGGAACAGGCAAAATAGTGATGCTTAATCCTTGTGGAGTGCGTTGTTACCACTTCCACACCCTCTGGCATGACTCCCAAAATGTGGTGCTACTTTCCCACCAACCAGTTGCTAGTTCTGGAGCCAGTGCCCAGTCTTGAGCATTTAATATGTTTCCACTGCAGAAGAAGGTGAATCAGGATAAATTGGTCCTGTAATGCCTCTGCTTTTAGGGGTGGGACGTGTATACCAAGAAATGTTTTCATTAAAAACAACAACAACAACAACATTACAGGCTTCCAAGATTGATGTAAAGCAAAAATTGACCAATCCTGGAATCTGTTTGCACTGGAAACGCCTGATGCAAAAATGTTTTTTTTTCAGAGAAGTTTTTTTTTTTTTTTTTTTACAGACATTATGTAAATGTCATGTTACACAAAGGCTCCCAGACACTATATTTTGTTGGTCAGTCTGTTGCATTAAAATCAGCTTCTGATTGCATGAAGACACTGAAACAAAATATGTTGAAGGGCTGAAAAATATAGATTTGATCTTGATTTGAATAGTCCCAATATCGATTGTGAGCGTCTTGTAGTCTCTGTTGAATGTAATGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_09976030_09976302.mRNA True 797 mRNA 0.40 1 9975571 9976367

Neighbor

gene id symbol gene type direction distance location
CI01000012_09974294_09974754 NA coding downstream 515 9973339 ~ 9975056 (-)
CI01000012_09926268_09941904 UNC5B coding downstream 33177 9926073 ~ 9942394 (-)
CI01000012_09894361_09922003 MYOFL coding downstream 53128 9893656 ~ 9922443 (-)
CI01000012_09862141_09892366 PARGA, PARG coding downstream 83205 9861875 ~ 9892366 (-)
CI01000012_09830411_09851586 OGDHL coding downstream 123701 9830165 ~ 9851870 (-)
CI01000012_09984871_10009730 NA coding upstream 7939 9984306 ~ 10009885 (-)
CI01000012_10114837_10117992 NA coding upstream 138029 10114396 ~ 10119291 (-)
CI01000012_10119912_10169990 NA coding upstream 143545 10119912 ~ 10169990 (-)
CI01000012_10189922_10194006 NSMCE4A coding upstream 213509 10189876 ~ 10194006 (-)
CI01000012_10201667_10213604 NA coding upstream 225030 10201397 ~ 10213604 (-)
G75212 NA non-coding downstream 158535 9815978 ~ 9817036 (-)
G75189 NA non-coding downstream 206062 9766445 ~ 9769509 (-)
G75004 NA non-coding downstream 333627 9641710 ~ 9641944 (-)
G75001 NA non-coding downstream 335922 9639446 ~ 9639649 (-)
G74997 NA non-coding downstream 338427 9636905 ~ 9637144 (-)
G75230 NA non-coding upstream 10998 9987365 ~ 9987685 (-)
G75645 NA non-coding upstream 109584 10085951 ~ 10086261 (-)
G75646 NA non-coding upstream 109908 10086275 ~ 10086512 (-)
G75647 NA non-coding upstream 112689 10089056 ~ 10089273 (-)
G75648 NA non-coding upstream 113638 10090005 ~ 10090218 (-)
G74982 NA other downstream 399599 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 573603 9398076 ~ 9402378 (-)
CI01000012_09082056_09083285 NA other downstream 892082 9081877 ~ 9083489 (-)
CI01000012_09071892_09073410 NA other downstream 902114 9071371 ~ 9073457 (-)
CI01000012_09068458_09070536 NA other downstream 904904 9067906 ~ 9070765 (-)
G75608 NA other upstream 635548 10611915 ~ 10620871 (-)
CI01000012_12047175_12052116 NA other upstream 2072677 12046728 ~ 12052541 (-)
CI01000012_12079581_12084139 NA other upstream 2102569 12078936 ~ 12084260 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other upstream 2978079 12954446 ~ 12957833 (-)
G77287 NA other upstream 3642909 13619276 ~ 13633819 (-)

Expression


Co-expression Network