CI01000012_09977219_09983804


Basic Information

Item Value
gene id CI01000012_09977219_09983804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 9977011 ~ 9983866 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_09977219_09983804.mRNA
GTATAAATATACATCTTTTTTTTTGTTGTTGTTCTAAAAGTTATATCCAGTAACAATCGACAGCATTCTACAGACTTGAATTTAACTTGAATATTCCTTTTTATCAGTGTAAATTATCATTTCTCTTCTATGTGAGACAGAAAAAAAAAAAAACATATAGTCACACCTGGGCATAAACCACAGATTGGCTGAGGTCTAATCTTCAGGCATGAACCGGGTTGAACTTCCTTTGAAGGCTAAGAAGATGAGGGAAATCTCCATGGCCTCAGAAAGTCTCTCTTTCAAGGCAGAAAGCACAAAGGCAGGTGGACTGCAGGAGACCTATTCACGTGGCCCTGGCACCACCGCTTCCAGACCCCTGCCGAAAGGAATCCGACATGCTACCCAGACCCCCACAGGCACCATCAGGGGTTTGGCTTGGAATAGAGCTACTGTATGCAGCAGTTGCTGGACCCTGCCAGACACAGCAGCCTGGGGAAAGGCTGTCCGCCAAAGACACTGTTGGCTTGGCATGAGCCTCGGCTGCAGATTTATGGTGGTGTACATGCACAGTATTGGCAAAGCATTAAAACTGTCTACCATTAATACAGAGAGCACTAGATGGATATGGCTGCACTTTCTGAAACTGTCTGATATTCATGCTTCACACACACTTACCCACATAAACGCACGGGTCATTCTGTGTACTAGAAACACAAAATCAACAGAAAAATCAGATGTTGTTTCCTTTTTGTACAAGGTTTATTTTTTTCTGTCTTTCAGGAGACAGGAAGGCATTGAGCTAAACCTTAATTACTCCATGAACACCAGGGGTTCTGCTTTTTATCCGCTGCTTGGAAGCTCAGCATGGCAAGCAGAAAGAGAGGAGATCAACAGAATATTCCTCTCTGAAGGGAGAGAGAGAGATGAGTGCAAATGCAGCAGTCACATCCCTTCATCTGGTTCTTAGTTACCTATCACACTGCCTTACTACTAGATAGATAGAATCGCTGTACAGGTTTTAATATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_09977219_09983804.mRNA True 1011 mRNA 0.43 5 9977011 9983866

Neighbor

gene id symbol gene type direction distance location
CI01000012_09828421_09828926 NA coding upstream 147623 9828421 ~ 9829388 (+)
CI01000012_09815706_09822346 CHATA, CHAT coding upstream 154340 9815706 ~ 9822671 (+)
CI01000012_09812937_09814478 SLC18A3, SLC18A3A coding upstream 161594 9812421 ~ 9815417 (+)
CI01000012_09796386_09801947 RGR, RGRA coding upstream 174467 9796291 ~ 9802544 (+)
CI01000012_09764936_09778598 CDHR1A coding upstream 197610 9764582 ~ 9779401 (+)
CI01000012_10196272_10198737 HPS6 coding downstream 212406 10196272 ~ 10198816 (+)
CI01000012_10223957_10235955 NA coding downstream 239831 10223697 ~ 10236276 (+)
CI01000012_10244843_10249396 NA coding downstream 260977 10244843 ~ 10249499 (+)
CI01000012_10260457_10272063 NT5C2B, NT5C2, NT5C2A coding downstream 275869 10259735 ~ 10272262 (+)
CI01000012_10296725_10299883 CYP17, CYP17A1 coding downstream 312762 10296628 ~ 10301555 (+)
G75115 NA non-coding upstream 45135 9931534 ~ 9931876 (+)
G75113 NA non-coding upstream 54859 9921373 ~ 9922152 (+)
G75089 NA non-coding upstream 117057 9859679 ~ 9859954 (+)
G75087 NA non-coding upstream 118493 9858290 ~ 9858518 (+)
G75055 NA non-coding upstream 234763 9741467 ~ 9742248 (+)
G75147 NA non-coding downstream 2246 9986112 ~ 9986370 (+)
G75148 NA non-coding downstream 3499 9987365 ~ 9987724 (+)
G75258 NA non-coding downstream 79516 10063382 ~ 10063692 (+)
G75311 NA non-coding downstream 109981 10093847 ~ 10094170 (+)
G75272 NA non-coding downstream 154431 10138297 ~ 10140069 (+)
G73578 NA other upstream 1609384 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 2169156 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 4052706 5922385 ~ 5929186 (+)
G71623 NA other upstream 4160406 5813517 ~ 5816605 (+)
G71548 NA other upstream 4415578 5550493 ~ 5561433 (+)
G75533 NA other downstream 1160951 11144817 ~ 11145739 (+)
G76385 NA other downstream 2646889 12630755 ~ 12675666 (+)
G76374 NA other downstream 2761665 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 3031640 13029435 ~ 13038899 (+)

Expression


Co-expression Network