G159182


Basic Information

Item Value
gene id G159182
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 18108163 ~ 18109539 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU215770
GGTCCTTCAGACAGGTCACTTGTTTTTGGAGGTCTCCAGTCTGAGCCACTAGCTCTGTGCAAATGGCCTGAGCCTCCTTCTTTGGATCCAATGTCAGAACAAGCTCCGAGGGGCTGTGGGGGAACCTGCTGATGATGTCCTGTACTGCCTCACTTAGGTAACAGCACTGCTGTCTCAGGCTGATCAGAAAGTTTAACAGCTCCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215770 True 207 lncRNA 0.52 2 18108163 18109539

Neighbor

gene id symbol gene type direction distance location
LOC107197792 LOC107197792 coding upstream 72467 18030488 ~ 18035696 (+)
wee2 wee2 coding upstream 78158 18023904 ~ 18030005 (+)
agk agk coding upstream 97609 18004007 ~ 18010554 (+)
LOC103029004 NA coding upstream 113793 17985993 ~ 17994370 (+)
kbtbd4 kbtbd4,LOC107708223,LOC107738697,LOC107596956,LOC107672308 coding upstream 139227 17964383 ~ 17968936 (+)
cftr cftr,LOC107738689,LOC107583749,LOC107596947,LOC107708216 coding downstream 25178 18134717 ~ 18164724 (+)
LOC103028633 NA coding downstream 151626 18261165 ~ 18265803 (+)
arpin arpin coding downstream 305988 18415527 ~ 18435115 (+)
kmt5b kmt5b,LOC107738677,LOC107694947,LOC107596936,LOC107583742,LOC108264420,LOC107726382,LOC107672243 coding downstream 352559 18462098 ~ 18468279 (+)
chka chka,LOC108424340,LOC107738676,LOC107726368,LOC107694945,LOC107583738 coding downstream 363397 18472936 ~ 18491526 (+)
G159129 NA non-coding upstream 111435 17995698 ~ 17996728 (+)
G159122 NA non-coding upstream 161480 17942316 ~ 17946683 (+)
G159120 kif23,LOC107686310 non-coding upstream 170075 17926988 ~ 17938088 (+)
G159115 NA non-coding upstream 237695 17870007 ~ 17870468 (+)
G159028 NA non-coding upstream 508809 17596059 ~ 17599354 (+)
G159184 asz1 non-coding downstream 4466 18114005 ~ 18128429 (+)
G159272 NA non-coding downstream 301773 18411312 ~ 18411936 (+)
LOC111194744 NA non-coding downstream 303822 18413361 ~ 18413950 (+)
G159274 NA non-coding downstream 318616 18428155 ~ 18428426 (+)
G159298 NA non-coding downstream 398872 18508411 ~ 18508695 (+)
rapsn rapsn other upstream 122259 17971096 ~ 17985904 (+)
smad6 smad6,smad6b,LOC107583766,LOC107672304,LOC107596967,LOC107738716,LOC107686299 other upstream 735957 17327100 ~ 17372206 (+)
zwilch zwilch other upstream 918912 17177675 ~ 17189251 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other upstream 935935 17101612 ~ 17172228 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other upstream 1309763 16779506 ~ 16798400 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other downstream 415989 18525528 ~ 18576437 (+)
G159666 NA other downstream 2075977 20185516 ~ 20186919 (+)
G159728 NA other downstream 2627059 20736598 ~ 20737049 (+)
G159748 chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 other downstream 2899763 21009302 ~ 21011794 (+)
fam174b NA other downstream 2951117 21060656 ~ 21074573 (+)

Expression


Co-expression Network