G159728


Basic Information

Item Value
gene id G159728
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 20736598 ~ 20737049 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU216494
ctcacatggtttttcctaccactgctttgctgacgacactcagctatacctgtcgttctcaccagatgatcactcaatctctgcacgaatatcacagtctctcagacatatccgcatggatgaaggaacatcacctccaactaaacctctcaaagactgaacttctggtcataccagcaaaaccttctattcaacacaactttgccataaccatcgactctctctctctctcaccgacaaaggttgctaggaacctgggtgtcatggttgatgaccagcttctcttcacgcaccatgtggcctcagtcgctcgatcctgccgctttgcgctttacaacatcggaaaaattcgaccgtttctgacgcaacaggccactcaactcctggtacaagctgtggtaatctcacgcctcgactactgcaatgccgtactaactggcctcccggcctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216494 True 452 TUCP 0.49 1 20736598 20737049

Neighbor

gene id symbol gene type direction distance location
arrdc4 NA coding upstream 62371 20666244 ~ 20674227 (+)
LOC103025942 NA coding upstream 889040 19775339 ~ 19847558 (+)
mef2a mef2a,LOC107715609,LOC107690382,LOC107715212 coding upstream 964471 19666624 ~ 19772127 (+)
LOC111194775 NA coding upstream 1216045 19515607 ~ 19520553 (+)
fan1 NA coding upstream 1224373 19500023 ~ 19512225 (+)
lysmd4 NA coding downstream 8519 20745568 ~ 20751796 (+)
rgma rgma,LOC107715216,LOC107690376,LOC107715612,LOC107693037 coding downstream 249575 20986624 ~ 21007290 (+)
LOC103034607 si:dkeyp-59c12.1,LOC108431221,LOC105905574,LOC107715203 coding downstream 514655 21251704 ~ 21255960 (+)
LOC103034933 LOC108431189,LOC101061116 coding downstream 618070 21355119 ~ 21371584 (+)
pex11a LOC108431222,LOC107714788,LOC107556261,LOC107690406,LOC107715221,LOC107691149 coding downstream 720307 21457356 ~ 21461379 (+)
G159709 NA non-coding upstream 205873 20530473 ~ 20530725 (+)
G159706 NA non-coding upstream 280434 20455811 ~ 20456164 (+)
G159705 NA non-coding upstream 287815 20448458 ~ 20448783 (+)
G159677 NA non-coding upstream 479385 20256507 ~ 20257213 (+)
G159662 NA non-coding upstream 523072 20207227 ~ 20213526 (+)
G159731 NA non-coding downstream 15066 20752115 ~ 20752674 (+)
G159734 NA non-coding downstream 15751 20752800 ~ 20753254 (+)
G159739 NA non-coding downstream 113305 20850354 ~ 20850931 (+)
G159744 NA non-coding downstream 160102 20897151 ~ 20897538 (+)
G159777 NA non-coding downstream 340170 21077219 ~ 21077425 (+)
G159666 NA other upstream 549679 20185516 ~ 20186919 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other upstream 2160161 18525528 ~ 18576437 (+)
rapsn rapsn other upstream 2750694 17971096 ~ 17985904 (+)
smad6 smad6,smad6b,LOC107583766,LOC107672304,LOC107596967,LOC107738716,LOC107686299 other upstream 3364392 17327100 ~ 17372206 (+)
zwilch zwilch other upstream 3547347 17177675 ~ 17189251 (+)
G159748 chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 other downstream 272253 21009302 ~ 21011794 (+)
fam174b NA other downstream 323607 21060656 ~ 21074573 (+)
G159926 LOC108434146,LOC108434147,LOC108434134 other downstream 1410795 22147844 ~ 22152785 (+)
G160134 NA other downstream 2116363 22853412 ~ 22854081 (+)
G160306 NA other downstream 3382080 24119129 ~ 24119825 (+)

Expression


Co-expression Network