Item | Value |
---|---|
gene id | G160144 |
gene name | NA |
gene type | non-coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035914.1 |
NCBI id | CM008317.1 |
chromosome length | 41377133 |
location | 22847391 ~ 22847763 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU217025 | True | 373 | lncRNA | 0.32 | 1 | 22847391 | 22847763 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC103027133 | fzd9,fzd9b,LOC107563503,LOC107713270,LOC107691950 | coding | upstream | 30993 | 22813535 ~ 22816398 (+) |
LOC103026853 | LOC108429884 | coding | upstream | 110762 | 22728533 ~ 22736629 (+) |
rnf7 | rnf7,LOC107557824,LOC107713281,LOC107692028 | coding | upstream | 119945 | 22722720 ~ 22727446 (+) |
LOC103028656 | LOC108264789,LOC108429874 | coding | upstream | 454816 | 22302354 ~ 22392575 (+) |
snrpa | snrpa | coding | upstream | 559750 | 22282694 ~ 22287641 (+) |
LOC103027426 | LOC103027426 | coding | downstream | 44709 | 22892472 ~ 22893301 (+) |
LOC103030816 | NA | coding | downstream | 212812 | 23060575 ~ 23094876 (+) |
LOC103026225 | cntn5,LOC107691883 | coding | downstream | 530106 | 23377869 ~ 23673136 (+) |
LOC103025495 | LOC108429891 | coding | downstream | 899979 | 23747742 ~ 23913263 (+) |
LOC103024981 | NA | coding | downstream | 1095930 | 23943693 ~ 23949888 (+) |
G160129 | NA | non-coding | upstream | 101093 | 22745357 ~ 22746298 (+) |
G160115 | NA | non-coding | upstream | 125631 | 22721208 ~ 22721760 (+) |
G160106 | NA | non-coding | upstream | 174487 | 22670116 ~ 22672904 (+) |
G160098 | NA | non-coding | upstream | 197325 | 22649831 ~ 22650066 (+) |
G160096 | NA | non-coding | upstream | 198472 | 22648636 ~ 22648919 (+) |
G160137 | baz1b | non-coding | downstream | 9329 | 22857092 ~ 22860616 (+) |
G160142 | selenot,selt1b,LOC108429894,LOC108264179,LOC107557827,LOC107710848,LOC107684611 | non-coding | downstream | 47292 | 22895055 ~ 22899397 (+) |
G160160 | NA | non-coding | downstream | 63796 | 22911559 ~ 22948189 (+) |
G160168 | NA | non-coding | downstream | 117570 | 22965333 ~ 22966591 (+) |
G160212 | NA | non-coding | downstream | 379651 | 23227414 ~ 23227734 (+) |
G159926 | LOC108434146,LOC108434147,LOC108434134 | other | upstream | 694606 | 22147844 ~ 22152785 (+) |
fam174b | NA | other | upstream | 1772818 | 21060656 ~ 21074573 (+) |
G159748 | chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 | other | upstream | 1835597 | 21009302 ~ 21011794 (+) |
G159728 | NA | other | upstream | 2110342 | 20736598 ~ 20737049 (+) |
G159666 | NA | other | upstream | 2660472 | 20185516 ~ 20186919 (+) |
G160134 | NA | other | downstream | 5649 | 22853412 ~ 22854081 (+) |
G160306 | NA | other | downstream | 1271366 | 24119129 ~ 24119825 (+) |
LOC103037315 | LOC108435313,LOC107551446,LOC107714780 | other | downstream | 3476057 | 26323820 ~ 26345682 (+) |
LOC103021732 | gramd1b,gramd1bb,LOC108264679 | other | downstream | 3769499 | 26617262 ~ 26755313 (+) |
G160919 | ptx3 | other | downstream | 4057481 | 26905244 ~ 26907627 (+) |