G161065


Basic Information

Item Value
gene id G161065
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 27410488 ~ 27410708 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU218236
tttctgcgctagaaatgcgcactctctctgcttttagactctttggcccgtttttctgcgttagaaatgcgcaccctctctgcttttagactctttggcccgtttttctgcgttagaaatgagcactctctctgcttttagactcttttgccccgtttttctgcgctagaaatgcgcaccctctccgcttttagactctttggcccatttctgacacctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218236 True 221 lncRNA 0.48 1 27410488 27410708

Neighbor

gene id symbol gene type direction distance location
tiparp tiparp,LOC106613254 coding downstream 33751 27339409 ~ 27376737 (-)
lekr1 NA coding downstream 113489 27136682 ~ 27296999 (-)
ptx3 NA coding downstream 492820 26905211 ~ 26917668 (-)
LOC103047806 NA coding downstream 604154 26801289 ~ 26806334 (-)
LOC103035975 LOC107714781 coding downstream 984216 26349161 ~ 26426272 (-)
LOC107196896 NA coding upstream 8904 27419612 ~ 27420256 (-)
LOC103029583 LOC108437982,LOC108264139 coding upstream 283035 27693743 ~ 27704738 (-)
gmps gmps coding upstream 308346 27719054 ~ 27751937 (-)
LOC103046178 LOC108437989,LOC108263992,LOC108434102,LOC108263974 coding upstream 573655 27984363 ~ 27988762 (-)
LOC111194787 NA coding upstream 581157 27991865 ~ 27996076 (-)
G161062 NA non-coding downstream 2154 27408072 ~ 27408334 (-)
G161057 NA non-coding downstream 25910 27367862 ~ 27384578 (-)
G161042 NA non-coding downstream 215291 27191465 ~ 27195197 (-)
G161038 NA non-coding downstream 238550 27171404 ~ 27171938 (-)
G161030 NA non-coding downstream 256302 27153446 ~ 27154186 (-)
LOC111194786 NA non-coding upstream 9778 27420486 ~ 27421684 (-)
G161136 NA non-coding upstream 281727 27692435 ~ 27703228 (-)
G161147 NA non-coding upstream 368016 27778724 ~ 27779787 (-)
LOC111194796 NA non-coding upstream 770907 28181615 ~ 28191026 (-)
LOC111194797 NA non-coding upstream 777288 28187996 ~ 28189702 (-)
G160979 ccnl1,ccnl1a,LOC107710830,LOC107684610,LOC107714439,LOC107691967,LOC107563513 other downstream 291235 27109707 ~ 27119253 (-)
LOC103037634 NA other downstream 1064779 26342351 ~ 26345709 (-)
G160715 NA other downstream 1671126 25738881 ~ 25739362 (-)
LOC103041696 NA other downstream 1807776 25600660 ~ 25602712 (-)
G160566 NA other downstream 1933641 25476094 ~ 25476847 (-)
kcnab1 kcnab1,LOC108263953,LOC107675612,LOC102797568 other upstream 19233 27429941 ~ 27578918 (-)
LOC111194804 NA other upstream 1182792 28593500 ~ 28652947 (-)
LOC103037190 NA other upstream 1476203 28886911 ~ 28941387 (-)
G161711 NA other upstream 2904898 30315606 ~ 30325858 (-)
LOC103042221 LOC105901649,LOC107568871,LOC105028370,LOC108413244,LOC567622,LOC103367052,LOC107379323,LOC100706402,LOC101466533 other upstream 3288462 30699170 ~ 30781708 (-)

Expression


Co-expression Network