CI01000012_10502102_10533782


Basic Information

Item Value
gene id CI01000012_10502102_10533782
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 10502102 ~ 10533942 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_10502102_10533782.mRNA
GTTCCCCATTCACTGTATTTTAAATCTATTTTAATAATTTCACCGAACTTCGTCTCCGTTTCCGCTTCCGGTCAGTTCCTCCAATCGGCCATATTCCGCCGCTCAGTCTCAACCCAGTCGCCGCTCCGTTGCCGAAAGCCCATCATAGTTTCATTTAACAGGGGATGGTCTTCCATTTATAACGATCCAACTGAACAGAGTGAATCGGGGGAAAGACCGGTGATTTTATCCAGAGACGTTGACAGAAAACGGGCCAAAATGACGACGCGATCGGAGAGGGAAAAGGCTCAGAAACTGAACGAGCAGCATCAGGCCATTCTGTCCAAAATGCTGAGAGAGGATGATAACAAATACTGCGCCGACTGCGAAGCCAAAGGTCCATTATCTCCAGAGCATGTGAGAATATTTAGGCAGGAGGCAGTCTTCGGCTCTGCGGTGATGTCGCAAGCCAGCAGCTTCTCAAGCTCCTCTCTCAGCTTTCGTCTTAACCAGACCAGTTTCATCCACTCTGAGCTCTCCAGTGTCTTAAGAGCTGTGTGGGTGGCACTGGCGGGGTCAATGGTTTACTCTACTGTTGCATGGTGGGCATGCAAAAGCATGCCAGGCATCCTGCGGGCAGAATACAGATCCCATCCCCCCCCCCGCTACCACGGATACGGCTCCGTACTGCGAGAGAGCGACCTCGATGGGCCTCTTGGAATCTTGGTGTGTTTATTTGTATCCGCTGTGCTGGAATACACCGGAACCTGGGAGTGCATATATCACGCGTCAAATCAGTCAACTTGGACCAATGGACCCCCGAGCAGATACAGCATATACTCTTCCTTCACTCTGATCCATCATTCTCATATTAATTTGTCTCTGACAGACTTAGACAGTGTGCAGAGCATGGGCAACACCAAGGCAAGACAGCTGTATGAAGCTCATCTCCCAGAAAACTTCAGACGGCCGCAAACTGACCAGTATCCTTGAGTCTATCTGTCTGTTTTTGTTTGTGTAATTGTGGTTGCAAATATACTCTAATGACCTTTGCTAGTCATTTGGTGAAAGTCAGCATCAACTTTCTACTCAGAGACTGAGGTTGTTGTGTGGTACACATGCTTTCTTGGTCGTCTGGAGAGAATTGACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_10502102_10533782.mRNA True 1132 mRNA 0.49 6 10502102 10533942

Neighbor

gene id symbol gene type direction distance location
CI01000012_10499885_10500843 SDHAF4 coding upstream 1043 10499215 ~ 10501778 (+)
CI01000012_10489814_10496226 TLX1, TLX1.L coding upstream 5518 10489727 ~ 10496584 (+)
CI01000012_10469322_10470665 LBX1A, LBX1 coding upstream 30729 10468583 ~ 10471373 (+)
CI01000012_10296725_10299883 CYP17, CYP17A1 coding upstream 200547 10296628 ~ 10301555 (+)
CI01000012_10260457_10272063 NT5C2B, NT5C2, NT5C2A coding upstream 229840 10259735 ~ 10272262 (+)
CI01000012_10572910_10604787 NA coding downstream 38888 10572830 ~ 10605280 (+)
CI01000012_10608607_10619833 NA coding downstream 74665 10608607 ~ 10620458 (+)
CI01000012_10661067_10678624 OGFRL1 coding downstream 126747 10660689 ~ 10679416 (+)
CI01000012_10714254_10788932 NA coding downstream 180312 10714254 ~ 10788932 (+)
CI01000012_10852509_10860759 NA coding downstream 316042 10849984 ~ 10860868 (+)
G75429 NA non-coding upstream 41715 10460088 ~ 10460387 (+)
G75356 NA non-coding upstream 181342 10320542 ~ 10320760 (+)
G75355 NA non-coding upstream 182817 10318993 ~ 10319285 (+)
G75349 NA non-coding upstream 208657 10293213 ~ 10293445 (+)
G75467 NA non-coding downstream 152075 10686017 ~ 10686254 (+)
G75468 NA non-coding downstream 152523 10686465 ~ 10686685 (+)
G75469 NA non-coding downstream 152745 10686687 ~ 10687042 (+)
G75470 NA non-coding downstream 153300 10687242 ~ 10687474 (+)
G75474 NA non-coding downstream 170209 10704151 ~ 10704372 (+)
CI01000012_10223957_10235955 NA other upstream 277815 10223697 ~ 10236276 (+)
G73578 NA other upstream 2134475 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 2694247 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 4577797 5922385 ~ 5929186 (+)
G71623 NA other upstream 4685497 5813517 ~ 5816605 (+)
G75533 NA other downstream 610875 11144817 ~ 11145739 (+)
G76385 NA other downstream 2096813 12630755 ~ 12675666 (+)
G76374 NA other downstream 2211589 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 2481564 13029435 ~ 13038899 (+)
G76645 NA other downstream 3117917 13651859 ~ 13652234 (+)

Expression


Co-expression Network